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current user: public |
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Query: PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MEGHEEVRTGWSRWDSLWPFLLFYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFLLPINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDKD | Last |
1 | -8.250 | sp|O14525|ASTN1_HUMAN Astrotactin-1 OS=Homo sapiens GN=ASTN1 PE=1 SV=3 | ali | 14 | 91 | VHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFG.................................................................... | 197 |
2 | -6.410 | sp|Q96M86|DNHD1_HUMAN Dynein heavy chain domain-containing protein 1 OS=Homo sapiens GN=DNHD1 PE=1 SV=2 | ali | 14 | 6 | ...QDSSPAAWRYLHAVLGLLPPYRELLVGHLDLLPFLAPWVQTHLHLDLLGAIVQAFPPDSSLLDSASHADCCPQKRR................................................................................................ | 87 |
3 | -6.360 | sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 | ali | 31 | 23 | ....EEIMAGWTADDSNLNTACPFCKSN--LPLLNIEFKD....................................................................................................................................... | 57 |
4 | -6.320 | sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2 | ali | 28 | 25 | ....EEIMAGWTADDSNLNTTCPFCGNI--LPFLNIEIRD....................................................................................................................................... | 59 |
5 | -6.160 | sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2 | ali | 13 | 20 | ..GHVDFK-----------FVLN--SNITNIPQIQVTLLKNKAPGLGKVNALNIEVEQNGKPSLVDLNEEMQHMDVEESQCL-------LCPFLEDHKEDILCGPVWLASGLDLSGHTSPKLVKGMAGGKYRSFLI....................................... | 140 |
6 | -5.800 | sp|Q9BYJ9|YTHD1_HUMAN YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1 | ali | 30 | 9 | .......EAPWST-DPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNNIYQH.......................................................................................................................... | 55 |
7 | -5.690 | tr|Q9BTQ8|Q9BTQ8_HUMAN ATXN7L1 protein OS=Homo sapiens GN=ATXN7L1 PE=2 SV=2 | ali | 16 | 1 | MDGADESEKLDCQFSTHHPRPLAFCSFGSRLMGRGYYVFDRRWDRFRFALNSMVEKHLNS................................................................................................................... | 60 |
8 | -5.510 | sp|Q7Z739|YTHD3_HUMAN YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1 | ali | 26 | 9 | .......EAAWST-DQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNT.............................................................................................................................. | 51 |
9 | -5.320 | sp|O75129|ASTN2_HUMAN Astrotactin-2 OS=Homo sapiens GN=ASTN2 PE=2 SV=2 | ali | 10 | 92 | VHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFG.................................................................... | 198 |
10 | -5.150 | sp|Q17RQ9|NKPD1_HUMAN NTPase KAP family P-loop domain-containing protein 1 OS=Homo sapiens GN=NKPD1 PE=2 SV=1 | ali | 9 | 19 | ........VAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGR--DVFRDNSRELHTMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSI........................................................................ | 115 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |