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Query: PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RFYCHEVVQRWISPDGKVTDMALLRGFLFCYCDVWALGSDMEVRPHNSLYDDVVARSCAYPKMRILPQLRRNGFKGDFHGISPVRLFKALLSDPRIETLMKGGEIEVMKHFLFNTRTADECWASYLIAKRHKYQIDNLSMWCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKALast
1 -6.410sp|Q69384|ENK2_HUMAN HERV-K_7p22.1 provirus ancestral Env polyprotein OS=Homo sapiens GN=ERVK6 PE=1 SV=1  ali   12  103..............................................................................................................................................................................................................................PYMLVVGNIVIK--PDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
2 -6.240sp|Q902F9|ENK5_HUMAN HERV-K_19p13.11 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   12  103..............................................................................................................................................................................................................................PYMLVVGNIVIK--PDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
3 -6.110sp|P61566|ENK11_HUMAN HERV-K_22q11.21 provirus ancestral Env polyprotein OS=Homo sapiens PE=2 SV=1  ali   11  111........................................................................................................................................................................................................................................IVIKPDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWILVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
4 -6.110sp|P61567|ENK12_HUMAN HERV-K_1q22 provirus ancestral Env polyprotein OS=Homo sapiens PE=2 SV=1  ali   12  103..............................................................................................................................................................................................................................PYMLVVGNIVIK--PDSQTITCENCRLLSCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
5 -6.080sp|Q902F8|ENK6_HUMAN HERV-K_8p23.1 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   12  103..............................................................................................................................................................................................................................PYMLVVGNIVIK--PDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
6 -5.970sp|O71037|ENK3_HUMAN HERV-K_19q12 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=2  ali   12  111........................................................................................................................................................................................................................................IVIKPDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------ETSPSIHTLTEVLKGVLNRSK. 181
7 -5.900sp|P63135|POK12_HUMAN HERV-K_1q22 provirus ancestral Pol protein OS=Homo sapiens PE=3 SV=1  ali   12  103..............................................................................................................................................................................................................................PYMLVVGNIVIK--PDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSVHILTEVLKGVLNRSK. 181
8 -5.900sp|Q9UKH3|ENK4_HUMAN HERV-K_6q14.1 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   12  111........................................................................................................................................................................................................................................IVIKPDSQTITCENCRLLTCI---DSTFNWQHRILLVRA--REGVWIPVSMDR---------------EASPSIHILTEVLKGVLNRSK. 181
9 -5.890sp|O42043|ENK7_HUMAN HERV-K_1q23.3 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=2  ali   12  111........................................................................................................................................................................................................................................IVIKPASQTITCENCRLFTCI---DSTFNWQHRILLVRA--REGMWIPVSTDR---------------EASPSIHILTEILKGVLNRSK. 181
10 -5.820tr|E5RIB8|E5RIB8_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIAA0146 PE=4 SV=1  ali   12  8................................................................................................................................................................................................................................................EQRPEDRGAFSCGDCSRVVTSPVLKRVFLDCRSRPQCRVKVKLLQRSISSLGRSRDQEPWQKSSFLHLVSFWLRATK..... 95

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.