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current user: public |
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Query: PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | MKTLTFKYLKLFLLAVAMINLTSCEIEIDDFYDDDNIGGSYYNKSLDLCSRPWADTFYDADGNYCYQELNFYLDRHGEDYIRVEYPNGRYSESVYSFTWNWEDRSQYSLRMVYGPGDVSYLDDVWIRGNVLSGYLDGHDNYVDFTGV | Last |
1 | -6.580 | tr|E7ET22|E7ET22_HUMAN Uncharacterized protein OS=Homo sapiens GN=TMEM177 PE=4 SV=1 | ali | 10 | 6 | IGVPSGHCYKPFTT-PVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQ---CLAGTWALGVGAKYTLGLHAGPMNLRAASLSAAYACGGVEFYEKLLSGNLALRSLLGKDEKLQMWRG. | 177 |
2 | -6.360 | sp|P32926|DSG3_HUMAN Desmoglein-3 OS=Homo sapiens GN=DSG3 PE=1 SV=2 | ali | 15 | 34 | ........LGLLLLLLAPLLLLTCDCGAGSTGGVTGGFIPVPDGSEGTI-HQWGIEGAHPEDKEITNICVPPVTANGADFM.................................................................. | 105 |
3 | -5.910 | sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2 | ali | 7 | 16 | .VLPPFWAKLVVGSVAIVCFARSYDGDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLT............................................................................. | 88 |
4 | -5.700 | sp|A8MWY0|K132L_HUMAN UPF0577 protein KIAA1324-like OS=Homo sapiens GN=KIAA1324L PE=2 SV=2 | ali | 12 | 46 | .............YLILNLHIPGFKPPTSMTGATGSELGRITFVFETLCSADCVLYFMVDINRKSTNVVESWGGTKEKQAYTHI-----FKNATFTFTWAFQRTNQG------QDNRRFINDMVKIYSITATNAVDG.......... | 159 |
5 | -5.640 | sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5 | ali | 13 | 1 | MTDKSIVILSLMVFHSSFINGKTCRRQLVEEWHPQPSSYVVNTLTENICLDFYRDCWFLG....................................................................................... | 61 |
6 | -5.590 | sp|Q6UXG2|K1324_HUMAN UPF0577 protein KIAA1324 OS=Homo sapiens GN=KIAA1324 PE=2 SV=2 | ali | 11 | 45 | ............DFMILTLVVPGFRPPQSVMADTENKEVARITFVFETCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYI-----EENTTTSFTWAFQRTTFH------EASRKYTNDVAKIYSINVTNVMNG.......... | 160 |
7 | -5.320 | sp|Q15582|BGH3_HUMAN Transforming growth factor-beta-induced protein ig-h3 OS=Homo sapiens GN=TGFBI PE=1 SV=1 | ali | 6 | 21 | ...................GPNVCAVQKVIGTNRKYFTNCKQWYQRKICGKSTVISYECCPG..................................................................................... | 63 |
8 | -5.170 | sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3 OS=Homo sapiens GN=PIGO PE=2 SV=3 | ali | 17 | 22 | PRHNGAYALRLGIGLLLCTRLAGCPEET....................................................................................................................... | 53 |
9 | -5.170 | sp|Q15063|POSTN_HUMAN Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2 | ali | 6 | 19 | ...................GPNVCALQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPG..................................................................................... | 61 |
10 | -5.170 | tr|F5H628|F5H628_HUMAN Uncharacterized protein OS=Homo sapiens GN=POSTN PE=4 SV=1 | ali | 6 | 19 | ...................GPNVCALQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPG..................................................................................... | 61 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9. |