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Query: PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNRKNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQNLast
1 -5.130sp|Q7Z4M0|CO060_HUMAN Uncharacterized protein C15orf60 OS=Homo sapiens GN=C15orf60 PE=2 SV=2  ali   6  1......................................................................................................................................................................................................................................................................................................MAEAGKVPLSLGLTGGEAAEWPLQRYARCIPSNTRDPPGPCLEAGTAPCPTWKVFDSNEESLVLTIVISGHFFIFQGQTL-SLIGSKDWLKIVRRVDCLLFGTTIKD---------KSRLFRV-QFSGESKEQALEHCCSCVQKLAQYITVQ...... 147
2 -4.910tr|O95431|O95431_HUMAN Uncharacterized protein OS=Homo sapiens PE=2 SV=1  ali   5  30........................................................................................................................................................................................................................................................................................................................................................................YVSPWKPNSKQRTRELLAPPVWIIPYIEQMSKAMLQLKALESSDLTEVVVKLQTKWMLQSMAEWHCQHQEQGMLKLAEAMNALKLDPWMKRT 128
3 -4.910sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   8  1....................................................................................................................................................................................LPKIIEVGL-CEVFELIKETRFSHP----------SLCLRSLQALLNVLQGQQPEGLQSEPPEVLESLFQLLLEITVRSTGMNDSTGQSLTALSCACLFSLVASWGETGRTLQAISAILTNNGSHACQTIQVPTILNSLQRSVQAVLKAALMHKWPLKEISVDEDDQCLLQNDGFFLY--LLCKDGLYKIGSGYSGTVRGHIYNSTYAQGY---LLYRDVNNHSMTAIRISPETLEQDG................................. 252
4 -4.770sp|Q69384|ENK2_HUMAN HERV-K_7p22.1 provirus ancestral Env polyprotein OS=Homo sapiens GN=ERVK6 PE=1 SV=1  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLTCI------DSTFNWQHRILLVRA---REGVWIPVSMDR--------------ASPSVHILTEVLKGVLNRSKR... 182
5 -4.630sp|Q902F9|ENK5_HUMAN HERV-K_19p13.11 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLTCI------DSTFNWQHRILLVRA---REGVWIPVSMDR--------------ASPSVHILTEVLKGVLNRSKR... 182
6 -4.590sp|P61567|ENK12_HUMAN HERV-K_1q22 provirus ancestral Env polyprotein OS=Homo sapiens PE=2 SV=1  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLSCI------DSTFNWQHRILLVRA---REGVWIPVSMDR--------------ASPSVHILTEVLKGVLNRSKR... 182
7 -4.560sp|P61566|ENK11_HUMAN HERV-K_22q11.21 provirus ancestral Env polyprotein OS=Homo sapiens PE=2 SV=1  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLTCI------DSTFNWQHRILLVRA---REGVWILVSMDR--------------ASPSVHILTEVLKGVLNRSKR... 182
8 -4.550sp|Q902F8|ENK6_HUMAN HERV-K_8p23.1 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=1  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLTCI------DSTFNWQHRILLVRA---REGVWIPVSMDR--------------ASPSVHILTEVLKGVLNRSKR... 182
9 -4.440sp|O71037|ENK3_HUMAN HERV-K_19q12 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=2  ali   13  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPDSQTITCENCRLLTCI------DSTFNWQHRILLVRA---REGVWIPVSMDR--------------TSPSIHTLTEVLKGVLNRSKR... 182
10 -4.430sp|O42043|ENK7_HUMAN HERV-K_1q23.3 provirus ancestral Env polyprotein OS=Homo sapiens PE=1 SV=2  ali   12  110....................................................................................................................................................................................................................................................................................................................................................................NIVIKPASQTITCENCRLFTCI------DSTFNWQHRILLVRA---REGMWIPVSTDR--------------ASPSIHILTEILKGVLNRSKR... 182
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 5 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.