FFAS03 results for PB034883

Query: PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 .`
#	Score	Template	Links and tools	%id	First	`MRKELHNTKVTVRLRKSAYRNEWYLYIESYPVYTAGKSEPQRVREYLNRIVTTVVWDKTRTARTTSSSKSYKPKRDLNGVIQCKSEVDQEACIYADEVRKLRQREYDNADLYSDADTAQAEQKERLQQNFIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGENLPFFKIDNAFAEEYKRFLLTAP`	Last
1	-6.270	`sp\|O60293\|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3`	`ali`	8	11	`...............................................................................................................................QDILSYNLSLIGCAETSTNEEITASAEKYVEKLFGVNKDRMSMDQMAVLLVSNINESKGHTP`	72
2	-5.810	`sp\|Q14C86\|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2`	`ali`	6	34	`............................................................................................................................PEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRLASIAEDYRKRYIAYLTRC.`	101
3	-5.530	`sp\|Q96Q15\|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3`	`ali`	16	8	`.................................................................................................................................FSTNFRDTVDHIDHTQKPSLTQQVSGWLQSLEPFWVADLAFSTLLGQFLEDMEAY.....`	68
4	-5.360	`sp\|Q9C0F0\|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=Homo sapiens GN=ASXL3 PE=2 SV=3`	`ali`	14	1	`............................................................................................................................................MKDKRKKKDRTWAEAARLALEKHPNSPMTAKQILEVIQKELKETSGTSP`	50
5	-5.300	`sp\|Q96AQ6\|PBIP1_HUMAN Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Homo sapiens GN=PBXIP1 PE=1 SV=1`	`ali`	13	22	`.............................................................................................................................RQQELASLLRTYLARLPWAGQLKELPLSPAFFGEDGIFRHDRLRFRD----FVDALEDSLEE..`	80
6	-5.060	`sp\|O75840\|KLF7_HUMAN Krueppel-like factor 7 OS=Homo sapiens GN=KLF7 PE=2 SV=1`	`ali`	20	8	`..........................................................................................................................................................SIFQELQLYFSALPSLEETWQQTCLELERYLQTEP`	47
7	-5.040	`sp\|Q5VZ89\|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2`	`ali`	10	11	`LRKELESL--------LENEGDQVIFINQHPIIFNLVWYFRRLDLPSNL-ILTSEHCNEGVQLPLSSLSQDSKLVYIQDNINLHQEPREPLYVSWRNFNSEKKSSLLSEEQQETSTLVETIRQSIQHNNVLKPINLLSQQMKPGMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYGIAYNSL.....`	196
8	-5.040	`sp\|Q96FB5\|RRNAD_HUMAN Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2`	`ali`	9	32	`......................................................................................................................................EEYAERLQKAGPGLRTHCYRAALETVIRRARRRPGVQGIPRVHELKIEEYVQRG.`	88
9	-5.010	`sp\|Q9HC10\|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3`	`ali`	6	91	`VPEHVETRPLLNPDKPGIEQGRLELWVDMFP..............................................................................................................................................................`	121
10	-4.930	`sp\|Q96JB2\|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3`	`ali`	10	37	`.......................................................................................................................................AKVNDLAATAYKTIKTKLPVTLRSMSLYLSNKILFKPVRNNIQQVFQKF.....`	89

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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