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current user: public |
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Query: PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . | |||||||
# | Score | Template | Links and tools | %id | First | MRKELHNTKVTVRLRKSAYRNEWYLYIESYPVYTAGKSEPQRVREYLNRIVTTVVWDKTRTARTTSSSKSYKPKRDLNGVIQCKSEVDQEACIYADEVRKLRQREYDNADLYSDADTAQAEQKERLQQNFIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGENLPFFKIDNAFAEEYKRFLLTAP | Last |
1 | -6.270 | sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3 | ali | 8 | 11 | ...............................................................................................................................QDILSYNLSLIGCAETSTNEEITASAEKYVEKLFGVNKDRMSMDQMAVLLVSNINESKGHTP | 72 |
2 | -5.810 | sp|Q14C86|GAPD1_HUMAN GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2 | ali | 6 | 34 | ............................................................................................................................PEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRLASIAEDYRKRYIAYLTRC. | 101 |
3 | -5.530 | sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3 | ali | 16 | 8 | .................................................................................................................................FSTNFRDTVDHIDHTQKPSLTQQVSGWLQSLEPFWVADLAFSTLLGQFLEDMEAY..... | 68 |
4 | -5.360 | sp|Q9C0F0|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=Homo sapiens GN=ASXL3 PE=2 SV=3 | ali | 14 | 1 | ............................................................................................................................................MKDKRKKKDRTWAEAARLALEKHPNSPMTAKQILEVIQKELKETSGTSP | 50 |
5 | -5.300 | sp|Q96AQ6|PBIP1_HUMAN Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Homo sapiens GN=PBXIP1 PE=1 SV=1 | ali | 13 | 22 | .............................................................................................................................RQQELASLLRTYLARLPWAGQLKELPLSPAFFGEDGIFRHDRLRFRD----FVDALEDSLEE.. | 80 |
6 | -5.060 | sp|O75840|KLF7_HUMAN Krueppel-like factor 7 OS=Homo sapiens GN=KLF7 PE=2 SV=1 | ali | 20 | 8 | ..........................................................................................................................................................SIFQELQLYFSALPSLEETWQQTCLELERYLQTEP | 47 |
7 | -5.040 | sp|Q5VZ89|DEN4C_HUMAN DENN domain-containing protein 4C OS=Homo sapiens GN=DENND4C PE=1 SV=2 | ali | 10 | 11 | LRKELESL--------LENEGDQVIFINQHPIIFNLVWYFRRLDLPSNL-ILTSEHCNEGVQLPLSSLSQDSKLVYIQDNINLHQEPREPLYVSWRNFNSEKKSSLLSEEQQETSTLVETIRQSIQHNNVLKPINLLSQQMKPGMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYGIAYNSL..... | 196 |
8 | -5.040 | sp|Q96FB5|RRNAD_HUMAN Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2 | ali | 9 | 32 | ......................................................................................................................................EEYAERLQKAGPGLRTHCYRAALETVIRRARRRPGVQGIPRVHELKIEEYVQRG. | 88 |
9 | -5.010 | sp|Q9HC10|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3 | ali | 6 | 91 | VPEHVETRPLLNPDKPGIEQGRLELWVDMFP.............................................................................................................................................................. | 121 |
10 | -4.930 | sp|Q96JB2|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3 | ali | 10 | 37 | .......................................................................................................................................AKVNDLAATAYKTIKTKLPVTLRSMSLYLSNKILFKPVRNNIQQVFQKF..... | 89 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review. |