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Query: PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKRNYFFTMLAAVLLAVAGANAQESAEFRPAELAGIWQLCHYVSEIPDVPGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGYGTYQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIGDDGVMYLKYFIAKDLNGNELNTWFHETWKRVGMPAKFPEDLVLast
1 -6.840sp|Q8J025|APCD1_HUMAN Protein APCDD1 OS=Homo sapiens GN=APCDD1 PE=1 SV=1  ali   7  3.............HMLKHLHNGARITVQMPPTIEGHWVSTGCEVRSGPEFITRS-----YRFYHNNTFKAYQFYYGSNRTLIIRGKIRLRQASWIIR................................................................. 87
2 -6.530sp|Q8NCL9|APCDL_HUMAN Protein APCDD1-like OS=Homo sapiens GN=APCDD1L PE=2 SV=1  ali   8  22.......................PSTAILPPRLNGPWISTGCEVRPGP--------TRAYTFYPSRLFRAHQFYYEDPFSLLVKGKVRLRRASWVTR-------------GATEADYHLHKVGIVFHSRRALVDVTGRLNQT--ARAW-LPGALYELRSA.. 155
3 -5.990sp|Q15361|TTF1_HUMAN Transcription termination factor 1 OS=Homo sapiens GN=TTF1 PE=1 SV=3  ali   8  46...................................................................................FGKFSVKENKQLEKNV-----------EDFLALTGIESADKLLYTDRYPEEKSVITNLKRRYSFRLHIGRNIARPWKLI 113
4 -5.800sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=2 SV=3  ali   10  2............................SSPRLIPLWKLKLLLNDTINKSKQPSEDPKNCLIVLSDRSQAVAWMKSKTEDMVEKRTFSMTERLPPIQSMVHAGSFHILVVYCGDLILRLFGD........................................ 96
5 -5.530sp|Q14D04|MELT_HUMAN Ventricular zone-expressed PH domain-containing protein homolog 1 OS=Homo sapiens GN=VEPH1 PE=1 SV=1  ali   4  70.QEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGG...................................................................................................................... 112
6 -5.420sp|Q8NCE2|MTMRE_HUMAN Myotubularin-related protein 14 OS=Homo sapiens GN=MTMR14 PE=1 SV=2  ali   15  2...........................SSLSTDYGSWQMVTGCGSIQERAVLHTDSSLPFSFPDE................................................................................................. 39
7 -5.120sp|Q15468|STIL_HUMAN SCL-interrupting locus protein OS=Homo sapiens GN=STIL PE=1 SV=2  ali   12  238MDETRKLLLLL-----------ESDPKVYSLPLVGIWHIYSPQVWACCLRYIFNSSVQERVFSESGNFIIVLYSMTHKE-------YECFPCDGKIPDFRFQLLTSK....................................................... 334
8 -5.090sp|Q8WVS4|WDR60_HUMAN WD repeat-containing protein 60 OS=Homo sapiens GN=WDR60 PE=1 SV=3  ali   6  74...........MVVSVHDLPEKSFVPLLDSKYVLCVWDIWQ......................................................................................................................... 103
9 -4.970sp|Q7Z4M0|CO060_HUMAN Uncharacterized protein C15orf60 OS=Homo sapiens GN=C15orf60 PE=2 SV=2  ali   14  1................MAEAGKVPLSLGLTGGEAAEWPLQRYARCIPSNTRDPPGPCLEAGTAPCPTWKVFDSNEESGYLIVISGHFFIFQGQTLLEGF-------SLIGSKDWLKIVRRVDCLLFGTTIKDKSRL-------------RVQFSGESKEQAL 130
10 -4.900sp|Q5T3U5|MRP7_HUMAN Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1  ali   8  31.QLVLSALPHALLAVLSACYLGTPRSPDYILPCSPGWR............................................................................................................................ 67
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;