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Query: PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete), from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTKLVAVIALIFCAFMAEASKVEGNGNIITKEISVDNYSEIELGGNIEYSGNNFWGNRSNKKFPVFKYTHGRSASLKITIDENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVFADLDCKNLTSKVSGSGDITLKGKADEARYSVLast
1 -4.910tr|Q8N636|Q8N636_HUMAN B4GALNT1 protein OS=Homo sapiens GN=B4GALNT1 PE=2 SV=1  ali   12  15....................................................................................................................VEVQPLRSILVPG--------------------------LSLQAASGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQADLTLVSPGLD... 77
2 -4.700sp|Q8TEM1|PO210_HUMAN Nuclear pore membrane glycoprotein 210 OS=Homo sapiens GN=NUP210 PE=1 SV=3  ali   162.................................................................EILLSNHYTSSIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGQGPLSTTLTFSSPVTNQAIAIPVT........................................................... 247
3 -4.500sp|P01266|THYG_HUMAN Thyroglobulin OS=Homo sapiens GN=TG PE=1 SV=5  ali   112....................................................................................................................LTARGFCQIQVKTFGTLVSIPVCNNSSVQVGCLTRERLGVNVTWKSRLEDIPVASLPDLHDIERALVGKDLDLIQSGSFQLHLDSKTFPAE. 207
4 -4.360sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   5..................................................................................TRIVENIELKIQD--VHLRFEDGVTNPSHPFAFGICIKNVSMQNAVNEPVLMRKKQLDVAEFSIYWDVDCTLLGDLPQMELQEAMARSMESRSHHYVLEFASALLKRNCSKKPLRSRHSPRIDCDI 132
5 -4.340sp|Q7Z7H3|CB062_HUMAN Uncharacterized protein C2orf62 OS=Homo sapiens GN=C2orf62 PE=2 SV=1  ali   59.........................................VHASSRGFLDKMLCGNSLLGYLSEKLELMEQHSQDFIKFLILPMERKMSLLKQDDQLAVTRSIKEGEEVKTGVTSFPWSSIKGFISEAANLVLLRVMAWRRMVPSNAR----LTLDTEGKLCYLTYQNLGFQTIQVDHQQAEVFIVE.................... 202
6 -4.290sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1 SV=1  ali   1........................................................................................................................EEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNWHARS.............. 74
7 -4.230sp|Q9Y6R7|FCGBP_HUMAN IgGFc-binding protein OS=Homo sapiens GN=FCGBP PE=1 SV=3  ali   31........................................RLLISSLSESPASVSILSQADNTSKKVTVRPGESVMVNISAKAEMIG---SKIFQHAVVIHSDYAISVDTAELTLLRPIQALPGTSARNVKEFAVVAGAAGASVSVTLKGSVTFNGKFYPAGDVLRVTLQSSVDLSGSKVTASSPVAVLSGHSCAQKHTTCNHVVEQL 219
8 -4.170sp|P04114|APOB_HUMAN Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 SV=2  ali   3..............................................................................................GTILRVNDESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTERKIKGVISIPRLQAEARSEILAHWSPAKLLLQMDSSATAYGSHYDEEKIEFEWNTGTNVDTKKMTSNFPVDL 126
9 -3.980sp|Q8N5U0|CK042_HUMAN Uncharacterized protein C11orf42 OS=Homo sapiens GN=C11orf42 PE=2 SV=2  ali   3....................................................................MLDGQPCKIRLHMGDLRKKVAFLLLPPGQVSLQQTLPWLRSTHSIYVIYQVFSCSWLQLGLTSTAREPQLLRLLRLKFSLQSKGVL...................................................... 96
10 -3.960sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1  ali   16  2.......................................................................................................................LSAPNASVTGPHNLETCLSVVLLSLAMVMAGSGNLKV----LCRFLHMKTGGEMNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALL 88

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.