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Query: HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;, from HGM_OVER

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLQQAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLNRALYDDHGQVYDAIAGTFLVVGLTEDDFTSLTPEQIEKFKEKYQSPEIFTLFNGELHVMKMPPEEEKEQKESRKNDAKQKNPAKKKNRSGDARLast
1 -6.5001i1q_B mol:protein length:192 ANTHRANILATE SYNTHASE COMPONENT II  ali model follow..  13  35PAQTLIDRLATMKNPVLMLSPGGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKAIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGARL..................................... 181
2 -6.1001ve0_A mol:protein length:134 hypothetical protein (ST2072)  ali model follow..  14  1.........MKIISKEFTVKTRSRFDSIDITEQVSEAIKGINNGIAHVIVKHTTCAIIINEAESGLMKDFLNWAKNGHAHVISAIIGNSRVVPIIEGKLD................................................................ 107
3 -6.0705i65_A mol:protein length:150 Nonstructural proteins ORF1a  ali model follow..  14  34MRNAAGQFIEAAYAKALRIELAQLVQVDKVRGTLAKLEAFADTVAPQLSPGDIVVALGHTPVGGIFDLKVGSTKHTLQAIETRVLAGSKVVDPTPTPPPAPVPIPLPPKVLE.................................................... 150
4 -6.0302nbg_A mol:protein length:125 Translation initiation factor IF-2  ali model follow..  19  2.....................................SHMLDHLLEMILLVSEMEELKANPNRRAVGTVIEAKLDKGRGPVATLLVGDPIVVGTTYGRVRAMVNDSGRRVKEA................................................... 84
5 -5.9701i7q_B mol:protein length:193 TRPG  ali model follow..  16  36GAEVIIERLQHMEQPVLMLSPGGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKAIAHDGEGMFAGMANPLPVARYHSLVGSNIPADLTVNARFGEMVMAVRDDRRRVCGFQFHPESILTTHGARL..................................... 182
6 -5.9603lfh_A mol:protein length:144 Phosphotransferase system, mannose/fructose-specific component IIA  ali model follow..  20  24................VIIGKQENVHTVGLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFG---GSPFNIALSMMKEYDVKVITG--LLTSINVYDTTELLENISKIGKDGIKVIEKSSLKMLE...................................... 138
7 -5.9501e5k_A mol:protein length:201 MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A  ali model follow..  13  2........NLMTTITGVVLAGGKARRMGGVDKGLLELKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGDTPYIPPDLAARLNHQRKDAPVVWVHDGE...................................... 129
8 -5.9103dpi_A mol:protein length:285 NAD+ synthetase  ali model follow..  10  90....GAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQRNGVVIGTDHAAESVMGFFTKFGDGGADVLGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHA....................... 235
9 -5.8401i7p_A mol:protein length:274 NADH-CYTOCHROME B5 REDUCTASE  ali model follow..  10  165.......KDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMIQFA--ERVGHPKERCFTF...................................................... 270
10 -5.7905idj_A mol:protein length:242 Cell cycle histidine kinase CckA  ali model follow..  54.QTGVRAADLVRKLLAFSRKQTVQREVLDLGELISELRRLLREDVKLITDYGRDLPQVRADKSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARSDDGPGIPPDVMGKIFDPF.................................................. 193

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.