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current user: public |
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Query: HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 | |||||||
# | Score | Template | Links and tools | %id | First | MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLQQAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLNRALYDDHGQVYDAIAGTFLVVGLTEDDFTSLTPEQIEKFKEKYQSPEIFTLFNGELHVMKMPPEEEKEQKESRKNDAKQKNPAKKKNRSGDAR | Last |
1 | -6.500 | 1i1q_B mol:protein length:192 ANTHRANILATE SYNTHASE COMPONENT II | ali model follow.. | 13 | 35 | PAQTLIDRLATMKNPVLMLSPGGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKAIEHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGARL..................................... | 181 |
2 | -6.100 | 1ve0_A mol:protein length:134 hypothetical protein (ST2072) | ali model follow.. | 14 | 1 | .........MKIISKEFTVKTRSRFDSIDITEQVSEAIKGINNGIAHVIVKHTTCAIIINEAESGLMKDFLNWAKNGHAHVISAIIGNSRVVPIIEGKLD................................................................ | 107 |
3 | -6.070 | 5i65_A mol:protein length:150 Nonstructural proteins ORF1a | ali model follow.. | 14 | 34 | MRNAAGQFIEAAYAKALRIELAQLVQVDKVRGTLAKLEAFADTVAPQLSPGDIVVALGHTPVGGIFDLKVGSTKHTLQAIETRVLAGSKVVDPTPTPPPAPVPIPLPPKVLE.................................................... | 150 |
4 | -6.030 | 2nbg_A mol:protein length:125 Translation initiation factor IF-2 | ali model follow.. | 19 | 2 | .....................................SHMLDHLLEMILLVSEMEELKANPNRRAVGTVIEAKLDKGRGPVATLLVGDPIVVGTTYGRVRAMVNDSGRRVKEA................................................... | 84 |
5 | -5.970 | 1i7q_B mol:protein length:193 TRPG | ali model follow.. | 16 | 36 | GAEVIIERLQHMEQPVLMLSPGGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKAIAHDGEGMFAGMANPLPVARYHSLVGSNIPADLTVNARFGEMVMAVRDDRRRVCGFQFHPESILTTHGARL..................................... | 182 |
6 | -5.960 | 3lfh_A mol:protein length:144 Phosphotransferase system, mannose/fructose-specific component IIA | ali model follow.. | 20 | 24 | ................VIIGKQENVHTVGLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFG---GSPFNIALSMMKEYDVKVITG--LLTSINVYDTTELLENISKIGKDGIKVIEKSSLKMLE...................................... | 138 |
7 | -5.950 | 1e5k_A mol:protein length:201 MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A | ali model follow.. | 13 | 2 | ........NLMTTITGVVLAGGKARRMGGVDKGLLELKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGDTPYIPPDLAARLNHQRKDAPVVWVHDGE...................................... | 129 |
8 | -5.910 | 3dpi_A mol:protein length:285 NAD+ synthetase | ali model follow.. | 10 | 90 | ....GAQHDEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQRNGVVIGTDHAAESVMGFFTKFGDGGADVLGLTKRRVRALARMLGADEPLVLKTPTADLETLRPQRPDEHA....................... | 235 |
9 | -5.840 | 1i7p_A mol:protein length:274 NADH-CYTOCHROME B5 REDUCTASE | ali model follow.. | 10 | 165 | .......KDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMIQFA--ERVGHPKERCFTF...................................................... | 270 |
10 | -5.790 | 5idj_A mol:protein length:242 Cell cycle histidine kinase CckA | ali model follow.. | 9 | 54 | .QTGVRAADLVRKLLAFSRKQTVQREVLDLGELISELRRLLREDVKLITDYGRDLPQVRADKSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARSDDGPGIPPDVMGKIFDPF.................................................. | 193 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |