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Query: PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete), from HGM_OVER

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SVLDGFEAVGEKTTTNKMTMTVMESSVRFSKGVTEALGCPAYVKLLVNDKQKKIAVQACDAXDENAIKFCKTKRSKADGVDSDAAGKASSVTVRTTDVLVAVQKYFTFPPVADDQIAYFAMDGESYPDEKVVIFAVADASKGVSGKRGPRKLast
1 -7.0502lu7_A mol:protein length:84 Obscurin-like protein 1  ali model follow..  15  1SHMTRVRSTPGGDLELVVHLSGPGGPVRWYKD--ERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRI.......................................................................... 76
2 -6.3004qeg_A mol:protein length:91 Titin  ali model follow..  10  10KTMKNIEVPETKTASFECEVSHFNVPSMWLKN--VEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTFVCGNDQVSATLTVT.................................................................... 91
3 -6.2902mrn_A mol:protein length:67 Antitoxin MazE  ali model follow..  12  22......................NSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKE......................................................................................... 61
4 -6.0804agi_A mol:protein length:315 FUCOSE-SPECIFIC LECTIN FLEA  ali model follow..  10  1...................MSTPGAQQVLFRTGIAAVNSTNHLRVYFQDVYGSIRESLYEGSWANGTEKNVIGNAKLGSPVAATSKELKHIRVYTLTEGNTLQEFA............................................. 87
5 -6.0501waa_A mol:protein length:93 TITIN  ali model follow..  11  10KPLYGVEVFVGETAHFEIELSEPDVHGQWKLK--QPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTKSA.......................................................................... 85
6 -6.0101tit_A mol:protein length:98 TITIN, I27  ali model follow..  10  9KPLYGVEVFVGETAHFEIELSEPDVHGQWKLK--QPLTASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANAKSAANLKVK.................................................................... 90
7 -5.9601waa_F mol:protein length:93 TITIN  ali model follow..  11  10KPLYGVEVFVGETAHFEIELSEPDVHGQWKLK--QPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAQTKSA.......................................................................... 85
8 -5.9402dku_A mol:protein length:103 KIAA1556 protein  ali model follow..  10  13EELTNLQVEEKGTAVFTCKTEHPAATVTWRKG--LELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDIGQAQSRA......................................................................... 89
9 -5.9405k6p_A mol:protein length:137 Myosin-binding protein C, cardiac-type  ali model follow..  7  54KLEPAYQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEKCS.......................................................................... 130
10 -5.9001waa_E mol:protein length:93 TITIN  ali model follow..  11  10KPLYGVEVFVGETAHFEIELSEPDVHGQWKLK--QPLAASPDCEIIEEGKKHILILHNCQLGMTGEVSFQAANTKSA.......................................................................... 85
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.