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Query: HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;, from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKENQGYVIRRTILFDNQCGFALGENSRAPNPFVTWQFNGQDGHRDYFWGHYMNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPIDIGTYPNSYFNRPVHMDLYFTRQQVTGEIFQAWGAITYAHPLTEREMQDYELRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGHRGPELPKRSPLast
1 -40.200PF18789.1; A0A1V4IJF0_9CLOT/81-149; Defence against restriction A C-terminal  ali follow..  44  1.....................................................................................KSAYRYYSTQRPVDIGTFPKT-ENGPLYLVNFDKPESVEQGRFLAWGYLVYDAPLTEKQIGDYELRAAPG.................................................................................................... 69
2 -6.650PF18839.1; S0IWA5_9FIRM/7-76; Large polyvalent protein associated domain 24  ali follow..  9  12..ENLPKYTVLKIRKKSDDSHLYMAAAKKDDGTYAVWTC--NQKLKSLNHGHY.......................................................................................................................................................................................................... 64
3 -6.330PF06227.12; Q08FJ5_DPV83/1-130; dsDNA Poxvirus  ali follow..  10  2......DEFIYIDTTVEKNIVDIL-------KYYITWRGSSDFYDKHDC-GKIFKKLMLFDDNARKIMGDYDYLFIKNMNLSLDDGPRL...................................................................................................................................................................... 76
4 -6.250PF12737.7; A8N2T2_COPC7/197-610; C-terminal domain of homeodomain 1  ali follow..  9  1...........................AELQFAFAQVTSNARTLYQKVSESSLAVTLDSAVKDMTPELKRQLQSEKRKKLQGEQAAA--------------AYPSPERSPL-------------------------SLQTHLSPSVSAPSLPERTSPTGKRRLSPTIDSDDERAERSKKRPRLDAPATTPPPSKRVSNSLPSPALSECAALNEGLATVEDTPSTSAPVEVSKKR-KRRLSESDGTPCRKRPQSDP 199
5 -6.000PF13897.6; C3ZQJ8_BRAFL/353-482; Golgi-dynamics membrane-trafficking  ali follow..  8  1...............VGRGEVVTVRVPTHEDGAYLFWEFATDSYDIGF--GVYFEWTIAPSNAVSVHVSESSDEDDEEEDEGQDVEKGARS-------------RPPTDEIVPIYRRDCHVEVYAGSHMY-GLLKFDNSYSRSKTLYYRV......................................................................................................... 127
6 -5.920PF15226.6; H0WYS8_OTOGA/2-134; HCF-1 beta-propeller-interacting protein family  ali follow..  11  31.............................................................................................................................................................................SSPLRGAVLMSTKRRLEEEQEPLHKQFLSEENMATHFSRLSLHNDHPYCTPAVAFPPALPPLRSPCSELLLWRYPGS..... 107
7 -5.830PF16618.5; I3J7A1_ORENI/72-266; Linker region between SH3 and WW domains on ARHGAP12  ali follow..  18  140.....................................................................................................................................................................................................NDSESGDELSS--SSTEHMQTTSPTGQGRSDSPVYTNLQE---KISQSSLPPVPSGSP 193
8 -5.820PF01589.16; POLS_CHIKS/744-1247; Alphavirus E1 glycoprotein  ali follow..  10  213.......YANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPESKDVYANTQLVLQRPAAGTVHVPSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAMAVGNMPISIDIPDAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAIIKYAVSKKGKCAVHSMTNAVTIRE--------AEIEVEGNSQLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDH... 452
9 -5.790PF12604.8; FIBER_BPT7/358-522; Tail fibre protein gp37 C terminal  ali follow..  13  1.....QGGAMTGQLKLQNGHVLQL-ESASDKAHYILSK---DGNRNNWYIGR........................................................................................................................................................................................................... 43
10 -5.690PF02894.17; IOLW_BACSU/143-250; Oxidoreductase family, C-terminal alpha/beta domain  ali follow..  9  2........KLISEGSLEDINTYQVSYNRYRPEVQARWREKEGTA---YDLGSHIIDQTLHLFGMPKAVTANVMAQRENAETVDYFHLTLDYGKLQAILYGGSI........................................................................................................................................................ 97
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 5 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.