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current user: public |
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| Query: HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;, from HGM_OVER |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . | |||||||
| # | Score | Template | Links and tools | %id | First | MQVDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHINCQGCRVDGIKTVFCDNMCGIRQCALEKGVATCGDCLDLERCPTVGEILENNPSALKNLKG | Last |
| 1 | -33.300 | PF12675.7; Q8TLS9_METAC/12-104; Protein of unknown function (DUF3795 topsan) | ali follow.. | 25 | 1 | ....................LTAPCGLDCFNCPFYLANDNEE---LRKQIQAGALSGGYTLSEGEAVCKGCRRENGRRTHELGLCKVYKCISLKDIESCADCSDFP-CDNLHP.............. | 93 |
| 2 | -8.480 | PF04216.12; B4EFM8_BURCJ/22-308; Protein involved in formate dehydrogenase formation | ali follow.. | 11 | 151 | WTDLASRVTPTDVPYLDQPGLCPVCGLQCGLC-------------------------TTEWHMVRTKCSHCDSTKGIAYHG-----IEGGSEAIKAESCDECKTY...................... | 244 |
| 3 | -8.180 | PF09788.9; T55BB_DANRE/3-255; Transmembrane protein 55A | ali follow.. | 15 | 65 | ..........................ISCRVCQSLISVEGKIHQHV-------------------VKCGVCNEATCKVTSQRIACPRPYCKRVINLGSCGHCAK-PHCRKVSSIGQRYPRKR..... | 194 |
| 4 | -8.150 | PF15616.6; Q5NWS3_AROAE/221-349; TerY-C metal binding domain | ali follow.. | 31 | 76 | .....................................................................GCPHCGNRFGLAMCGCGQIFCVSGTGEATCPGCNQ....................... | 110 |
| 5 | -8.010 | PF17266.2; YCTG2_CAEEL/43-192; Family of unknown function (DUF5332 topsan) | ali follow.. | 16 | 30 | ....................FTTGCQDECNDCPL--------LTSKLQIVDILSGEKSSAECPTLMDCLKCVAESNQDIFQINKCLRQDCAFHCFDGSCPKCSGF...................... | 108 |
| 6 | -8.000 | PF02335.15; NRFA_BACFN/56-493; Cytochrome c552 | ali follow.. | 12 | 169 | ............................CAQCHVEYYFKGDGKYILKAQHPDYEISQMGIHAQRGVSCADCHMPYKSEGGMKFSDHHIQSPLAMIDRTCQVCHRESEETLRNNVYDRQRKANEIRGR | 301 |
| 7 | -7.920 | PF01561.16; Q89905_9VIRU/654-1139; Hantavirus glycoprotein G2 | ali follow.. | 12 | 86 | ............................CGECKKYAYPWQTAKCFFEKDYQYETSWG------NPPDCTGCTACGVYLDKLRSVGKAYKIVSLKTRKVCIQLGTEQTCKHIDV.............. | 171 |
| 8 | -7.840 | PF05458.12; SIVA_HUMAN/1-175; Cd27 binding protein (Siva) | ali follow.. | 25 | 128 | ......................GQCE-LCGQCVR--------------------------------TCWGCGSV------ACTLCGLVDCSDMYEKVLCTSCAMFET.................... | 175 |
| 9 | -7.600 | PF05502.13; C5G7S7_AJEDR/66-528; Dynactin p62 family | ali follow.. | 20 | 6 | ..........................LYCEDC-------------------------------HQIKCPRCITEEIVCW-YCPNC--NRCARN-----CFNC---PICTSPLSVTTLGSADNGAQNG | 77 |
| 10 | -7.420 | PF01421.19; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease | ali follow.. | 12 | 103 | .....................ATFQGRMCDKHYGGGVALHSSTISLESLAVIIAQLLSLSMGIPYDDINKCH------------CPGDVCIMNPAAVHSSGVKLFSNCSV................. | 179 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51. |