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Query: PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759], from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRILLast
1 -7.250PF09342.11; Q7QJ48_ANOGA/1774-1887; Domain of unknown function (DUF1986 topsan)  ali follow..  4  1.............................................................................................................WPWNTNI---SGLIIDASWIIVSGSCTRLVNLRHQYLAVVAGGAKSYLHIEGPYEQVVRVDCYHYIPE-AETVMLHLATK--LSFSRHVLPTFVPENENLTDSECLAVGQDK.. 114
2 -6.620PF03762.17; G1KGZ6_ANOCA/41-210; Vitelline membrane outer layer protein I (VOMI)  ali follow..  10  16.................................................CPERSYAIGFSIKVTLAGRPMEGAFTDDTSLNGFTVHAALRPNVVSCTFLIQGSNMNHGHW-FQLKTEPDQGAGDDTSVNNIRFRCSNGLPLEEVGGTFGDYSEWSNTCYKGGICGMQTKQEPYQGVWVDDTALNDVRFFCC................................ 170
3 -6.510PF04015.12; B8E3B5_DICTD/41-314; Domain of unknown function (DUF362 topsan)  ali follow..  11  124GAIKNVGMGCAPRSGKQMQHAQFKPNPNPNLCIGCRRCVDH--------CPTGALEMVDKKSKLTRPELCIGCGECAVVCPTSAIKILWNESAIGLQEKMVEFTYGILK---KYAFIN--------MDVSPDCDCAGWHDANLVPDV-----------------------GILGGWDIVAIDQASSD.................................... 274
4 -5.820PF15068.6; G3TRR0_LOXAF/1-204; FAM101 family  ali follow..  14  93..................................................................................GEGVEFDPLPPTEVRYTSSVKYDSERHFINDVHMPLGLAVASCSQTVTCVPNCTWRNYRA--EVRFEPRHTTIVYPKYPKTVYTTTLGYNCRKTLRRFLSSVELEAP.................................. 204
5 -5.820PF13798.6; X2GN24_9BACI/8-168; Protein of unknown function with PCYCGC motif  ali follow..  11  9...................................................................SACGTDKQATEEQPKDTQNEASHDGHAHVTGDIQEETASADVLPTFLDSQSENIR-------------LVYQIAGQSTEILEWMPCYCGC---ESVGHKSNLNCFIQEKKQDGTIVWDDHGTRCAVCLEIALQSAKMHKDGMTLKEIRQTIDET.. 147
6 -5.700PF06986.11; A5VGS1_SPHWW/301-570; Type-1V conjugative transfer system mating pair stabilisation  ali follow..  15  221.....................................................................................................................................................SSSFLGICKTKRTA-FESKLSRILQEQGRVQLGK-APKKEQCQGFT............................ 270
7 -5.660PF17813.1; I3LYN9_ICTTR/402-505; RET Cadherin like domain 4  ali follow..  14  9....................................................................................................................VNKGARHYAQIGKVCVENCQEFSGIHVQYKLQPSST---NCSILGVVTSAEDTSGTLFVNDTETL-----QRPECAELQYTVVASDRQARKQAQAP-LLLTVEGT.. 104
8 -5.630PF04208.14; R9SLV8_9EURY/4-176; Tetrahydromethanopterin S-methyltransferase, subunit A  ali follow..  12  1......................................................................................................KKSPADGWPLEYEVGDPESP---------VAATT--LASELAGDIVGAGAAIAGTCHTENLGVEKVVANTISNPNIRFLIVCGAEVQ--QCFEALHANGCDPEKKKVNGAIGAIPFVDNL. 115
9 -5.570PF04304.13; Q6MNU2_BDEBA/9-124; Protein of unknown function (DUF454 topsan)  ali follow..  16  12...............................................................................................................LGLGFVGIFLPLLPTTPLLLTAYCFARSSIRWHKWLLAQPHMILDWQKHGVIRTRAKLMATGLMVPLVSASLFFGNVPIYAKISAAV......................... 102
10 -5.490PF06157.11; Q4J9W3_SULAC/6-286; Protein of unknown function (DUF973 topsan)  ali follow..  12  3.................................................................................................................LGRIKIGSLFLELSSILFIVSIIVVLYTAFNT-VAKYINTSNGVSGLNQSQLQQELLKQLNTPLIHAIPIIVTVIAIIGSILILLNEKIKTNYSDLGKVGTIIMIIGAVV 114
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.