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current user: public |
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Query: PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . | |||||||
# | Score | Template | Links and tools | %id | First | RQSEDSRHSKYVIRIICEGEKTEPLFFTSLCDKLLDENGGEEEWDVKTIPQPDIPEEKPSMADRGLYKNKKKRVKGKKDKLQPEVQGQPPLSWIRLSRKKLNEGVDEAWAVFDKDEHPARKDAFEEAEKLIDDKKVNIAFSSRSFEYYLLLHFEYLYHPFHATECGERIDGKKVNYNCMTEKSKENACHGEKCINGYARLKKYWNETKTSQSTFPLIEKRLKAGIINAKRLRIESNSKENCPIYDRNPYTNVDKLVCRL | Last |
1 | -70.900 | PF13707.6; R6VZB4_9FIRM/22-203; RloB-like protein | ali follow.. | 20 | 1 | .............YLICEGSETEIRYFKKFRSRECHIDI--------------VPIPSQYKSADKLVQKARSTIAM---------------------NPYYPDEGDIIWCVFDCDDNTN--QMLAKAKQVAIKEGYKLAFSNPSFEVWFLLHFNNQITPVENCDAAIKLLKQKGRLEQ----------------------------YEKNKNVYDQLKPLQALAIERAKNRVSVLKEEHTEISRQSNPATTVAELVEYL | 182 |
2 | -12.600 | PF14103.6; U5QDL6_9CYAN/11-197; Domain of unknown function (DUF4276 topsan) | ali follow.. | 8 | 1 | ................LEDS-GHEEFILGLVEHI----------------------------EEAGYHRQQLSNDVRNSTGGKGRVISALQKFLQELRVGDNNPFDFLIVAIDGNCTGQKRTEVQELAERSKTGNIICAIPDPHIEHWYMAD-------------PLSFKKATDLDSQPVPPKYKCEKEIYKKALIEAFAKCGVIPPLDGIEYGRNFALEMNDACQRCPSLGH.......................... | 181 |
3 | -9.160 | PF11536.8; Q5JEB1_THEKO/3-242; Protein of unknown function (DUF3226 topsan) | ali follow.. | 8 | 3 | .............LLLLEG-RTDVSFFLPLIKEL---------KEAKCEDLPVLEEGPKKKGLSRAICLSKDDTRLVVWHANGKDNLKNALKLIFKAIERLEDTPAIIGIARDVDTEESILNWAKSTL---QSGGFEPDVKDGYLGIKVIFDARDIDLKKELELLMALLAKKESSLSKLEGSISQLRKDLGRKLTPKDIMHLLAIARNYGGDSMSGLYRNFIEKLIRENRVEEFLNE------------SGLKEFLNAI | 239 |
4 | -8.410 | PF00176.23; RAD54_SCHPO/267-575; SNF2 family N-terminal domain | ali follow.. | 9 | 48 | QSPQAGKPTIEKAIITCPSSLVK-NWANELVKWLGKDAITPFILDGKSS-------------KQELIMALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIG--MLLCDEGHRLKNSDSLTFTALDKLNVQRRVILSNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELAKIVNRFI--RRTNDILSKYLPVKYEHVVEFQLSLYKHFITSPEINKILRGTGSQPLKAIGLL | 299 |
5 | -8.150 | PF15995.5; B4MNI5_DROWI/683-841; Domain of unknown function (DUF4771 topsan) | ali follow.. | 8 | 3 | ...............................................................................................................FDPDDDELMDRLLFDGMKELQKDQRYVLATLP-LREWIKRRF---GKSYTQKELNEHLEESQRVFEVVQTMQSSPPEPDLMGLDKISAKKSTFANFKAIHALGVKVKKAYCEKLNQIY.............................. | 123 |
6 | -7.160 | PF14491.6; C0ZFK7_BREBN/30-262; Protein of unknown function (DUF4435 topsan) | ali follow.. | 8 | 1 | ..........DAVFCFVEGE-DSKYYAAKIESIEPSYKYHFINSKGKEG----------------------------------------VLKLFRLITGISEYDLIKTLYFVDRDFDELIDNPHIYETPCYSIENL--YTTKNTICRVLQREFQLDETDDDYYTALHAFSTHQSEFHDA................................................................................ | 126 |
7 | -6.940 | PF07323.12; B1LYD3_METRJ/18-171; Protein of unknown function (DUF1465 topsan) | ali follow.. | 10 | 14 | ........................................................................................................FRDGMTLV--EETAAYLDGEGRDESRLVSRDATLSYAAESMRLWLLVQRAVAEGEMTPAEALQE----------------------KHRVKLGTAEPPKQQDFNLLPMRLQQLIVRARRLHSRILHLDALIAEDRPTPQPVESP---VAAQQGLL | 150 |
8 | -6.730 | PF01531.16; A8K2L2_HUMAN/21-334; Glycosyl transferase family 11 | ali follow.. | 6 | 125 | ..............VRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQKFLRGLQVNGSRPGTFVGVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFVVTSNGGDGIEGSPAKDFALLTQCN--HTIMTIGTFGIW............................................................................................................... | 274 |
9 | -6.340 | PF05883.11; Q8B9J7_NPVR1/1-134; Baculovirus U-box/Ring-like domain | ali follow.. | 7 | 19 | ................................................................................................KDYWPTCATECQICLEKIDDNGGI-----VAMPDTGLLNLEKMFHEQCIQRWRREH........................................................................................................... | 69 |
10 | -6.140 | PF12490.8; A5C3G6_VITVI/520-760; Breast carcinoma amplified sequence 3 | ali follow.. | 6 | 60 | ..SSSLKEKYHLLVFSPSGCVIQ--YLRISTGIDSTTVVSGLSTGYESTPDGDGRLVVEAVQKWNVCQKQHDSSKIFPEGIKKENAFHPETRSGVSKSKISPEERHHLYI-----------------------SEAELQMHQAQNPLWA-IYFQTMMVDGLEEN............................................................................................... | 216 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02. |