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Query: PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;, from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEGHEEVRTGWSRWDSLWPFLLFYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFLLPINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDKDLast
1 -66.600PF12953.7; F6B8R9_DESCC/2-131; Domain of unknown function (DUF3842 topsan)  ali follow..  58  1..................................RVAVIDGQGGGIGKAIVDKFRQAFGEEIEIIALGTNALATSLMLKSGANEGASGENAIVFNASRVDVILGTIGIITANSMLGELTPMMAKAIAESPAKKILIPLNRCNIEVAGIKNVPLPHYIDDAIELV........... 130
2 -7.880PF14979.6; TMM52_MOUSE/30-178; Transmembrane 52  ali follow..  14  13...........ARWSSLW-LLMLLCGVTAS---VRFCCLRKQTHT----------AWQPCDGTVIPVDSDSPAHSTVTSYSSVQYPLGMRLPLYFGEPDPDSMVPPTYSLYAS---ELPPSYDEVVKMIKAREEVAAPSEKTNSLPEA........................... 148
3 -7.300PF14881.6; C5FUZ2_ARTOC/120-304; Tubulin domain  ali follow..  13  62....RDLRPFAEECDQLKGIQIFS--------------TDDAWGGFAASYVDRLKDEYGGKSIWTAINGSSDPQREKRRLASANMARSLSEMCSQVTAFIPIAALPTRTPHYVRSDLHHIWYSSALISLVLESVSLPAR.................................... 184
4 -7.040PF08720.10; HEMA_INCAA/447-621; Influenza C hemagglutinin stalk  ali follow..  23  5..............DDLIIGLLFVAIVEAGIGGYLLGSRKVSGGGVTKESAEKGFEKIGNDIQILRSSTNIAIEKLNDRISHDEQAIRDLTLEIENARSEALLGELGIIRA--LVGNISIGLQESL................................................. 115
5 -6.950PF15347.6; PHAG1_HUMAN/2-432; Phosphoprotein associated with glycosphingolipid-enriched  ali follow..  18  10..GQMQI----TLWGSL-TFLIFLCSSCDREKKPRQHSGDHEN-----------LMNVPSDKEMFSRSVTSLATDAPASSEQNGALTNGDILSEDSTLTC........................................................................... 100
6 -6.930PF03181.15; F6HH21_VITVI/115-326; BURP domain  ali follow..  14  139.................YPYAVFHCHASHATKAYLVPMVGADGTKVKAVAACHIDPS-PRHLAFQVLKVKP----------------GTVPICHFLPEDHIV......................................................................... 209
7 -6.890PF06530.12; W1J5U0_9GAMM/1-120; Phage antitermination protein Q  ali follow..  13  1MRDIQQVLVLWGGWTT--PVAAGFSGLLPASGTSRPTCSDEDGLIIDICVARLRARGREEEFDYIKQ---HYMLGYSKREIARDLRVSESLVRHKMQVAESFI........................................................................ 108
8 -6.830PF00169.29; GRP1_CAEEL/262-380; PH domain  ali follow..  17  10.QSSNPLFSGALSWKKRWFVLLYYFDQMTDKEPKGIITLAN...................................................................................................................................... 53
9 -6.480PF14413.6; G2Q1R0_MYCTT/139-266; Thg1 C terminal domain  ali follow..  16  1....QNLRD-WRQVDC-------HINNLYNTTFWALIQLGGLDATEAEKTLKGTYAADKNEILFSRFGINYNNEPEMYKKGS............................................................................................. 73
10 -6.450PF11144.8; Q0P8U7_CAMJE/5-402; Protein of unknown function (DUF2920 topsan)  ali follow..  11  5IDSCDDVELGIKRTSKL--YRISYDD--EKDIKAIVFIVGGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFCARQSIDQKYNPK........................................................................................ 88

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 3 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Awobuluyi M, Yang J, Ye Y, Chatterton JE, Godzik A, Lipton SA, Zhang D. Subunit-specific roles of glycine-binding domains in activation of NR1/NR3N-methyl-D-aspartate receptors. Mol Pharmacol. 2007 Jan;71(1):112-22. Epub 2006 Oct 17.