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current user: public |
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Query: PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 | |||||||
# | Score | Template | Links and tools | %id | First | RFYCHEVVQRWISPDGKVTDMALLRGFLFCYCDVWALGSDMEVRPHNSLYDDVVARSCAYPKMRILPQLRRNGFKGDFHGISPVRLFKALLSDPRIETLMKGGEIEVMKHFLFNTRTADECWASYLIAKRHKYQIDNLSMWCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKA | Last |
1 | -56.900 | PF14284.6; F0R7K2_BACSH/254-406; PcfJ-like protein | ali follow.. | 40 | 1 | ...........................................................................................................................................MWCDTIDLLRRMGKDTHSPKYVCPADLKAEHDKLVEQRNRKEERERLVLRRKEAAQYEKD--------------YLLQKGKFFGIVITDGMLNVRVLESVAEIAEEGTLMHHCVYANA-YYRKENSLILSATGNKRIETVEVDLKKLCVVQSRGVCNQNTEYHDRI................. | 152 |
2 | -6.740 | PF11539.8; D0N966_PHYIT/51-244; Protein of unknown function (DUF3228 topsan) | ali follow.. | 7 | 26 | ....................................................................................................................................................NEFVKKVNEIYEANNKQLVDGYAPFCKHLFIKNFTGARLNMVAITQANAHMLMSDYDARTEYELPVLGRWFPSHSVTPRVAEYLDIILYSREQIIKENEAVDVPADPSHGDSPWGIVSIKAQDEDHELPMKPITMMRNAVGKEQG-GSGVPLDRGEYMKAVEYWRNHAV..... | 193 |
3 | -6.500 | PF06733.15; RTEL1_HUMAN/111-272; DEAD_2 | ali follow.. | 8 | 3 | ......................................................................................................................................................................SRTHSQLTQVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCRKKVAS-EKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFM--DAKSRRAHNIDLKGTVVI-------------DEAHNVEKMCEESASFDLTP | 159 |
4 | -6.490 | PF09242.11; Q0K5T8_CUPNH/354-420; Flavocytochrome c sulphide dehydrogenase, flavin-binding | ali follow.. | 12 | 2 | ....................................................................................................................................................................................................................................................QPLYNNTC---YSFTSDREAVHVA--------SVHRYDAAQKTMVTVPGSGGLSEAPNQLEGDYALAWAKGIWAEM.. | 66 |
5 | -6.430 | PF12063.8; K1WNW9_MARBU/644-933; Domain of unknown function (DUF3543 topsan) | ali follow.. | 11 | 76 | ...............................................................................................................................................YVKALSLLAKSMSSRINSAVQWVRNRFNEVLEKAEIVRLKLLDAQKKLPEDHPAHASSSKLGGTSSTDSVHLSPGITAEKLMY-DRALDMSRTAAINEIA--NEDLPGCEISYVTAI----MLEAVLENDDEVPPSQRRGASSSLREEQ-GEGIVNGINIEDRQAVMKVVQTIRTRMSS | 285 |
6 | -6.410 | PF06003.12; F7AWW9_XENTR/27-291; Survival motor neuron protein (SMN) | ali follow.. | 11 | 1 | .........................................................................................................................................................QSDDSDIWDDTALIKAYDKAVSSFKKALKNGDCTVSAEAEEKIPRTKRKNNKKNRSRKKCNAAPLKKW----------------------RVGDT---CNAIWSE----PATISSIDAKKG---TCIV--------VYSGYGNSEEQSLADLRFPDTSEAESDQREQGQ | 134 |
7 | -6.260 | PF04344.13; E0SIM0_DICD3/15-214; Chemotaxis phosphatase, CheZ | ali follow.. | 10 | 2 | .........................................................................................................EIISRIGQLTRMLRDSLKELGLDQAITEAAEAIPDARDRLDYVVQMTAQAAERALSCVEAAQPRQNQLEEESKSLKVRWDQWFENPIELSEARELVTDTRNYLESVPDHTA--------FTNAQLLEIMMAQDFQDLT--GQVIKRMMDVVQEIEKQLLMVLLENIPEKPSETRRANEGLLNGPQVDKTAAGIVSNQDQVDDLLDSL.......... | 198 |
8 | -5.720 | PF06438.12; Q4K5N8_PSEF5/1-205; Heme-binding protein A (HasA) | ali follow.. | 12 | 51 | .................................................................................................................................................................................................................................FDGTQYAIKSTASDAAFVADGNLHSHTLGSVDTISLGDT-LAGGSGSNYNLVSQEVSFTNLGLNSLKEE-GRAGEVHKVVYGLMSGDSSALAGEIDA | 153 |
9 | -5.590 | PF05323.12; Q9Q8J0_MYXVL/1-111; Poxvirus A21 Protein | ali follow.. | 9 | 15 | ......................................................................................................................................................................................................................................FNIIVPAISEKMRKEYDAYLKCVDTYDFKTSGVVAKMFIDSNGKPLPCSRTDIRSNNAIYCDNDENVLDFRKSCSKAYLDLFF......... | 111 |
10 | -5.500 | PF13350.6; E3GQR7_EUBLK/9-245; Tyrosine phosphatase family | ali follow.. | 9 | 121 | .................................................................................................................................................................................................................................................LNAPGGVVFHCTAGKDRTGVTAALLLELAGVDRRLIVDSYAKSAELMREKFRRMQPPGLPKSEAMEYMEKTLDYLERYFKS | 213 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |