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Query: PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;, from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSETKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSAMVKSLast
1 -7.560PF17338.2; H5X5Y4_9PSEU/18-249; Gene product 88  ali follow..  10  31........................VTCPAASACTR---------------------------IC----------YARNGTYLFPAVKAKHTEAMIRELSAPRLAGKFVRVHDAGDFFSDAYTLAWCRVMHAC----PQVTFYAYTKEVRRFKRLIEP 136
2 -7.460PF06607.11; A0A024R0B1_HUMAN/1-97; Prokineticin  ali follow..  13  24..................GACERDVQCGAGTCCAISLWLRGLRM----------TPLGREGEEC............................................................................................. 60
3 -7.390PF01666.17; A8WQR1_CAEBR/147-221; DX module  ali follow..  14  29LWFMGQYNVNGDEVTRHWTHCQFNKDCGKGHVCVK.......................................................................................................................... 63
4 -7.210PF01579.18; A8WNT2_CAEBR/32-189; Domain of unknown function (DUF19 topsan)  ali follow..  7  21FLHKNDDMKNKTMIDDLLKKCSKATTCLKSLSHCHIFGIDRTPVVENIVYTICDFTKWAANTPCNTKLESYEGECSPELNPFMDPHADEERKKIRDTMVKWCGREEWVQYRDLMLNLNDKVFKQ................................. 156
5 -6.860PF06951.11; L5KDY2_PTEAL/14-190; Group XII secretory phospholipase A2 precursor (PLA2G12)  ali follow..  6  92.......................TKCCNQLDVCYDTCGANKYRCDAKFRWCLH--------SICS--------DLKRSLGFVSNVEACDSLADTVFNTVWTLGCRPFMNSQRAACICVEEEKEEL................................ 177
6 -6.720PF14623.6; S3CBE6_OPHP1/613-780; Hint-domain  ali follow..  12  2...............................................................C--FASFCRVNMANGKVIRVNRL------------------------RKGMQVQTPRGPRAVSRVLKTPVSSIPMVTIGRSHNGADWVFP.... 74
7 -6.640PF09420.10; E5R1E4_ARTGP/5-239; Ribosome biogenesis protein Nop16  ali follow..  9  159......................................................................................GTTSAFDVVAELERQAAAQEEQLKNKKPRHQSKREEEWLERLVQKYGDDTARMARDRKLNPMQQTEADIGR 229
8 -6.520PF11014.8; Q6NAR7_RHOPA/21-142; Protein of unknown function (DUF2852 topsan)  ali follow..  15  76......................................................................................................GNRAFDEYRMETLRRLEEEQVQFKEFLDRLRHAKDKEEFDAFMAQ.......... 120
9 -6.360PF15882.5; W5MIN6_LEPOC/50-341; Domain of unknown function (DUF4735 topsan)  ali follow..  11  104....................CMTLTPCIVTKSCLSHQLLYFMMGRMQGCSNILQGEHRQARANCSNMMKSNVEFEKDGYPSQTRDIFIENIM-----LCGLAGFSDFYKSSWLQHIFF---QDPEEGCFGKDGKLHTYVVINNLLETLQLRKRVKRR 265
10 -6.280PF17914.1; A0A0D6YKF0_MASLA/151-328; HopA1 effector protein family  ali follow..  7  43FMSAITSLLNDRAVRFQIKVMNHPKRLRRRDNFILYVPDEVWRTYRSEVAEVQARHQDLLREDVPGFTL----PLGRGWSFAEEPIGITGMLSFGQHRAQLAADGIYSAYIHGAQ--VEERLSWIAWQYRKVGLDITHPYL................ 178
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.