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Query: PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;, from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNRKNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQNLast
1 -46.500PF14284.6; F0R7K2_BACSH/254-406; PcfJ-like protein  ali follow..  15  1.................................................................................................................................................................................................................................................................................................MWCDTIDLLRRMGKDTHSPKYVCPADLKAEHDKLVEQRNRKEERERLVLRRKEAAQYEKIVITDGMLNVRVLESVAEIAEEGTLMHHCV----YANAYYRKENSLILSATIGNKRIETVEVDLKKLCVVQSRGVCNQNTEYHDRII................. 153
2 -6.770PF09731.9; Q2UGP4_ASPOR/68-596; Mitochondrial inner membrane protein  ali follow..  7  320..................................................................................................................................................................................................................................................................................DLVEREREGRLSKLNELTANVSELEKL-TSSWKDVIDTNLKTQQLQVAVDAVRSVLERSSTPRPFVRELVAVKELAADDPVVEAAIASINPTAYQRGSQIIE--EDAGIASHAASLVLSKVMFKKDDDVESVLVRTELEKGDLDAAAREMNS-LKGWAKILSKDWLGDVRRVLEVKQ. 519
3 -6.630PF12063.8; K1WNW9_MARBU/644-933; Domain of unknown function (DUF3543 topsan)  ali follow..  8  128................................................................................................................................................................................................................................................................................................NRFNEVLEKAEIVRLKLLDAQKKLPEDHPAHPSNHASSSKLGGTSSTDSVHLSPGITAEKLMYD-RALDMSRTAAINEIA--NEDLPGCE--ISYVTAI-----MLEAVLENDDEVGASSSLREEQEKTEEEGEGIVNGINIEDRQAVMKVVQTIRTRMSSLKK 288
4 -6.390PF15265.6; F6Y0I7_ORNAN/3-538; FAM196 family  ali follow..  10  412...............................................................................................................................................................................................................................................................................................................DLQGRLQSVEESLHSNQEKIKVLLNVIQDLEKAR----------------------ALTEGRNFYRTGQDLNNC-------STCQNTACIIYSVE---------YDFRQQEGRFHQVLKTLDQVSPPQQVPVDPPVPEKQDIRRKSKKM 528
5 -6.270PF15279.6; B4N5Q1_DROWI/245-568; Sine oculis-binding protein  ali follow..  12  6...................................................................................................................................................................................................................................................................................................................................................................................KHVRHAV---SYVD-FQDGASQLQFCSEKNQYKMQIFCNETQAHLDMNPHLRDQGLDAGNEAALIDLWLRNCRSRSASPAS 86
6 -6.100PF15759.5; G5BQB5_HETGA/102-601; TMEM108 family  ali follow..  18  400...................................................................................................................................................................................................................................................................................................................................................................LAISVPISSCSVL--------CMNNLSYWNNAI---TMDYFNRHAVELPREIQSLETSEDQLSEPRSPANGDYRDTGMVLVNPFCQETLFVGNDQVS 498
7 -5.900PF15165.6; G1LGN7_AILME/23-259; Meiotic recombination protein REC114-like  ali follow..  11  16.......................................................................................................................................................................................................................................................................................................................................EPPRPGQDAGAASSPTWKVFDSNEESGNLVLTIVISGHFFISQGQTLLEGIGSKNWLKIVRRMDCLLFGTTIKD---------KSRMFRV-QFGGGSKEQALEHCGSCVQKLAQYVTVQVPDGVS 133
8 -5.850PF15673.5; H0WQS8_OTOGA/89-366; Circadian-associated transcriptional repressor  ali follow..  15  15.........................................................................................................................................................................................................................................................................................................................................................................QNIQGCTTEGDLLQKCKELQGYITPLTD----LLNRLKMGRFERGLSSFQVAMDRIQRIVGLQKPYMGEQVEGMLKTWFPHIAAQKSLLGH 113
9 -5.780PF12118.8; Q12NB5_SHEDO/103-424; SprA-related family  ali follow..  8  137.......................................................................................................................................................................................................................................................................................................................................QDIAKQQRQDAIRQQEQQSAQKAELAQAAQINQLSKRDAEVKSHEQAHASVGGATYEK-AVDGEVQIDVSVVNGDAQATLNKMMVYAAAMAPVQSMADIRVAAEALQKMNEAREALSIERQQGVV 276
10 -5.740PF06733.15; RTEL1_HUMAN/111-272; DEAD_2  ali follow..  10  3............................................................................................................................................................................................................................................................................................SRTHSQLTQVINELRNTSYRPKVCVLGSREQL--IHPEVKKQESNHLQIHLCRKKVASRS--NVEEKSLEQELASPILDIEDLVKSGSKHRVC-----YLSRNLKQQADIIFM---DAKSRRAHNIDLKGTVVI-----------DEAHNVEKMCEESASFDLTPHD. 161
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 5 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.