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Query: PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;, from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMELLast
1 -10.000PF14525.6; A0K0Q9_ARTS2/24-199; AraC-binding-like domain  ali follow..  10  23................................RGRMRSRVLDR---LCIVEVSASGHSVHARPGQRYFKLNLQLEGTGLLI-QDNREAVLRPGDLAIYDTNRPYTLAF---EEQARVMVVMFPHDSLSLPPDY--------VGQLSAVRLAGGHGLTGIVGPFIAQLAENLEALSGPSGSR-LAANALDL 170
2 -9.380PF06719.13; Q021L8_SOLUE/36-185; AraC-type transcriptional regulator N-terminus  ali follow..  11  2..........................................PGVHLMRFGWRSQPLVATQFPC-----MAMVIQGTKSVEF-GETNLEYGAGQYLLTSID-TSRIVNASKARPLLAVGVQIDFAELKEVIRRC---------DAMPQLNTQPGITIFDADLEILDAVVRLLRLLDTPEHSKPLAPLIEI 138
3 -8.930PF02311.19; Q8KJH7_RHILI/35-171; AraC-like ligand binding domain  ali follow..  9  1.........................................LGGLDYLAADYHRQDFSKHI---HNEYLIGLIERGVHDVWC-RGEVWHAGSGTVATFA-PGEPHFGGAGDDLGWSQKIFYMPEGLVRQVLEDSSQTEPGTIDFKSPFQE----------NAPVAHGLSAFWRLLEHEHSSALEIEEH.. 132
4 -8.550PF06339.12; ECTC_HAHCH/1-127; Ectoine synthase  ali follow..  18  1MIVRTEQARQSDRRVKADNWESVRMLLKDDNMGFSFHITTLYANKETPIHYQNHL-------------ESVYCISGEGEVETVDGEVHAIKPGTLYV............................................................................................. 86
5 -8.150PF05899.12; Q9I081_PSEAE/38-111; Protein of unknown function (DUF861 topsan)  ali follow..  17  27....................................................................EFCHFLDGYCIITPEGEQPVHLRAGDVFVIEPGLRGTWEVVETVRKY........................................................................... 73
6 -7.720PF06882.12; A0A0E0RF62_ORYRU/30-86; Protein of unknown function (DUF1263 topsan)  ali follow..  10  1.......................MPHVCPSSYNDFLAMVAMKPGMNLAGTDIPTPGVSTSALARDECLEVLIIPTGRGEA.............................................................................................................. 57
7 -6.960PF14725.6; C7PJA3_CHIPD/17-324; Domain of unknown function (DUF4466 topsan)  ali follow..  9  127FSAKSSNGETISYAMGPYKISKMDMVLDLPVKNAEACFISVADMAVYTEKDVP---------ANADKIDLVYLYRSITGISFNHALVSPGANAEYLPDVTMPPGLNRVTKIRKTWNLRDFHLARLQYGVYIDDLFEQLDMTGSPDYVINLKSEAGAWVETADRKYRAYIYMNKVEDSKKSATISMKRYTL 308
8 -6.690PF02678.16; Q8XXA8_RALSO/3-119; Pirin  ali follow..  14  38............................................LRVINEDRVAPGMGFGTHGHRDMEIISYVLDGELAHKDSLGNGSVLRPGDVQRMTAGTGVRHSEFAPDQTTHFLQIWV.................................................................... 117
9 -6.380PF06865.11; PPNP_PELCD/11-102; Pyrimidine/purine nucleoside phosphorylase  ali follow..  15  9...............................GKVTSRTVIFADGTKKTLGIMMPGEYTFDTAAA----EVMEMLGGSMEVLLPGATWQSFHEGQSFE............................................................................................. 71
10 -5.820PF06249.12; Q8Y7T4_LISMO/4-147; Ethanolamine utilisation protein EutQ  ali follow..  24  89....................................................................EVDYVIEGRLDVVI-DGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTY....................................................................... 138
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.