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Query: PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete), from HGM_OVER

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTKLVAVIALIFCAFMAEASKVEGNGNIITKEISVDNYSEIELGGNIEYSGNNFWGNRSNKKFPVFKYTHGRSASLKITIDENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVFADLDCKNLTSKVSGSGDITLKGKADEARYSVLast
1 -43.400PF10988.8; Q82V75_NITEU/79-237; Putative auto-transporter adhesin, head GIN domain  ali follow..  21  1.....................................PYTSLVLSGAFN-----------------TEIKTSSENRVIISGDSNYVESVEVNSSDGELIIRRPGP---GNDNLNVIVESISLQKLKISGAGSTNIYG-DFPDGLSVRKSGAGSINI--EGQASTLKLNLSGAGNTTARDFTVDNVEIDATGAGNIAVCAK-KSVAGSL 147
2 -7.980PF13349.6; Q8Y9D1_LISMO/52-365; Putative adhesin  ali follow..  15  82.............................LTKDTKLADLEVKSHSGDIDVADFKVKKFVSSTNSGELKVTNLEANTAQMATSSNIKANSSIETDSGKTELNLTGDLEVNGGSGDVNVAGVKAKKLKIIDSGDIELTSGTVTDLAVLT-TSSGDIDANTKGKIQ------SDSGSIELAGATNNVTAKTSSGDKNIEINSDSGEVELEL 272
3 -7.490PF17440.2; Q893D9_CLOTE/419-520; Thiol-activated cytolysin beta sandwich domain  ali follow..  15  1................................................................................................................................................KIVLDHSGAYVAQFQVTWDEVSYDEKGNEIVEHKAWEGNNRDRTAHFNTEIYLKGNARNISVKI 64
4 -7.290PF04151.15; Q7MFW4_VIBVY/630-702; Bacterial pre-peptidase C-terminal domain  ali follow..  13  11............................................................................................................................................TRELTLTIQGSGDADLYAC-HYHDYQWTNFTHGSNESIQIEKESDGYVKAGRYYLSISG......... 73
5 -6.790PF12984.7; R5J8F8_9BACE/3-113; Domain of unknown function, B. Theta Gene description (DUF3868 topsan)  ali follow..  9  3IQFIVLVLAALCLNTEDAFAQNRSYSGDIGIEPVRLE-----QSGDFLYIDMNFILKDVKVRTAHGVDFIP------QLVAPANTYNLPKVSVKGKDEYLAYERRLSLMSAKEKRKHVAP........................................................................................ 111
6 -6.730PF18099.1; B4D018_9BACT/390-498; DUF5010 topsan C-terminal domain  ali follow..  12  6.................................................................DIRALTGSGWAVTNTAAGEWVQFDKIDFSPGNYRFAIRYATTTANSRMRLYVDGVALPDVPLPATTSMNTFDTISLGQKTIG-WGTHTLKVMFVDGGVDLD.......................................... 105
7 -6.420PF10618.9; VPM_HAEIN/2-116; Phage tail tube protein  ali follow..  11  2..................................................................................TQFQGSAIIRLNGKEWPSD------------DGTLTPGGKERETVKGSRVYGFSEKPTEAMVECTVFNCAETDVMELQNITNATVEFEDIGQVYLLPGAWTVETGTLSADGKIKLKMASIECK... 114
8 -6.310PF05751.11; A0KKM1_AERHH/7-147; FixH  ali follow..  10  8...IIALPTAAVIGSISTAIIASKDGVNLVAED----------------------------------YYKQGKEINQDLSKFDRSEALIALEVNGNELTLKPLSGDIPAGQALYLSLFHPTLAGMDSEHMVTADGNGVYRLL-LDKPLTGKWHVRVDAFNHEWRLQETV....................................... 141
9 -6.160PF15621.6; E9Q079_MOUSE/1-116; Proline-rich submaxillary gland androgen-regulated family  ali follow..  9  1MKPLYVVFGLWLLIGCFLSGECHRGPRGQRDPRKPLAP----STHHPHSRHTQPDPKHGQFGLPPFLPMSSGFGKTSSFTLY---SPSFEVKVQPPSYTVHILGSILGQMRAISPQRNSPA....................................................................................... 114
10 -6.120PF01987.17; B1L4K3_KORCO/3-207; Mitochondrial biogenesis AIM24  ali follow..  13  33.........................TPNIQMKTRARAGVLDTIKLGVLGGQSFFVNDYTAVGGPGEVALASGDIEKLTLDGRGYIIQ------RSSYVASDPTVELDIKWQGFTKGIFGQGLFMIKTSGRGNLFINT--FGAIDRHELSAGESLIVDNFHLVDTCSYEVRRMGGLKELALSGEGLVVEVRGPGEVLIQTK........ 205
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.