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Query: HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;, from HGM_OVER

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLLANTYNSSYYGTVSATVPSGWLIPFTWIKVGRLITADDELAHVRLLVPHTYGTTSASASVYACLYDIRFQAARLast
1 -29.100d5xb0a_ d.26.1.0 (A:) automated matches {Pseudomonas syringae [TaxId: 223283]}  ali model 3D-neighbors follow..  12  3..........................DAPTEAALKAERTFMAGE-------------------------------KAKPGVKELADGILMTELTPGTGPKPDANGR--VEVRYVGRLPDGKIFDQSTQPQWFRLDSVISGWTSALQNMPTGAKWR----------LVIPSDQAYGAEGAGLIDPFTPLVFEIELIAVSQ....................................... 133
2 -27.900d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  13  45......................QDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKME-KDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDT--VVVNYKGTLIDGKEFDNSGEPLSFRLDGVIPGWTEGLKNIKKGGKIK----------LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK........................................ 210
3 -26.500d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}  ali model 3D-neighbors follow..  12  29...............AMAKGMQDAMSGAQLALTEQQMKDVLNKFQKDLMAKRTAEFN-KKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDT--VTVEYTGRLIDGTVFDSTGKPATFQVSQVIPGWTEALQLMPAGSTWE----------IYVPSGLAYGPRSVGPIGPNETLIFKIHLISVKKS...................................... 204
4 -26.200d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}  ali model 3D-neighbors follow..  11  2......................ASHEERMNNYRKRVGRLFMEQK-------------------------------AAQPDAVKLPSGLVFQRIARGSGKR-APAIDDKCEVHYTGRLRDGTVFDSSGKPTTFRPNEVIKGWTEALQLMREGDRWR----------LFIPYDLAYGVTGGGMIPPYSPLEFDVELISIKDGGKGRTAE............................... 148
5 -23.300d2y78a1 d.26.1.0 (A:1-113) automated matches {Burkholderia pseudomallei [TaxId: 272560]}  ali model 3D-neighbors follow..  11  3................................................................................VVTTESGLKYEDLTEGSGAEARAGQT--VSVHYTGWLTDGQKFDSSKDAFVLGGGMVIKGWDEGVQGMKVGGVRR----------LTIPPQLGYGARGAGVIPPNATLVFEVELLDV......................................... 113
6 -23.000d2f4ea_ d.26.1.0 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  13  5..........................................................................PKVDSEAEVLDEKVSKQIIKEGHGSKPSKYST--CFLHYRAWTKNSQHKFEDTELVLGKEKKELAGLAIGVASMKSG----------ERALVHVGWELAYGKEGNFSVPPMADLLYEVEVIGFDETKEG................................... 131
7 -22.000d3ey6a1 d.26.1.0 (A:35-150) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  6..................................................................................LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVTLGDCDVIQALDLSVPLMDVG----------ETAMVTADSKYCYGPQGRSYIPPHAALCLEVTLKTAVDG...................................... 115
8 -22.000d4dipa1 d.26.1.0 (A:19-138) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  2................................................................................ALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEDGSLFHSTHKWFTLGILEALKGWDQGLKGMCVG----------EKRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNG...................................... 119
9 -21.300d4jysa_ d.26.1.0 (A:) automated matches {Plasmodium vivax [TaxId: 126793]}  ali model 3D-neighbors follow..  11  1.............................................................................DKPYVKTESGILYKDLIDGEGDPIEEGDI--VYIHYQGKTTNDFRIIHST-RAGQYDQKHIRAIYEIVIGMKKH----------TRRQCVVPPHLAYPN-----HFPSQPLLYEIDVVKVVKKDSQGKTFIE............................. 123
10 -20.300d3b7xa_ d.26.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  5........................................................................ERLSQRMLDISGDRGVLKDVIREGAGDLVAPDAS--VLVKYSGYLFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRG----------ELARFLFKPNYAYGTLGCPLIPPNTTVLFEIELLDF......................................... 124
11 -19.800d3ni6a_ d.26.1.0 (A:) automated matches {Plasmodium vivax [TaxId: 5855]}  ali model 3D-neighbors follow..  1.........................................................................QETLEQVHLTEDGGVVKTILRKGEGGENAPKKGNEVTVHYVGKLSSGKVFDSSREKFHLGQGEVIKGWDICVASMTKN----------EKCSVRLDSKYGYGEEGCGSIPGNSVLIFEIELISFRE....................................... 124
12 -18.800d4laya2 d.26.1.1 (A:141-255) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  1..............................................................................DLTEEEDGGIIRRIQTRGEGYA-KPNEGAIVEVALEGY-YKDKLFDQREEIGEGENLDLPYGLERAIQRMEKG----------EHSIVYLKPSYAFGSVGKEQIPPNAELKYELHLKSFEKA...................................... 115
13 -18.200d5gpga1 d.26.1.1 (A:109-224) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  2......................................................................................KYTKSVLKKGDKTN-FPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKGVGKVIRGWDEALLTMSKG----------EKARLEIEPEWAYGKKGQAKIPPNAKLTFEVELVDID........................................ 116

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.