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Query: PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759], from HGM_OVER

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRILLast
1 -8.160d1l4da_ b.47.1.2 (A:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  12..........................................................................................EPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLLTAAHCLEKSPRPSSYKVILGAHQEV---NLEPHVQEIEVSRLFLEPTRKDIALLKLSSP.................................. 113
2 -7.360d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}  ali model 3D-neighbors follow..  13  3....................................................................................................GGKDAPVGKYPYQVSL---GASILDNNNVLTAAHCVDGLSN------LNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDVALVHLTNPIKFN-DLVQPIKLSTNDEDLESNPCTLTGWGST. 128
3 -6.780d2ebfx3 d.3.1.17 (X:1094-1285) Dermonecrotic toxin, ToxA {Pasteurella multocida [TaxId: 747]}  ali model 3D-neighbors follow..  20  1..........................................................................................................LENWQV---LTPPQGKILGLKQFKLTA--------GFPTEQSRLPLLENSVSEDLREELMQKIDAI--KNDVKMNSLVCMEAGSCDSVSPKVAARLKDMGLEA.............. 90
4 -6.290d4r3na1 c.2.1.3 (A:2-127,A:330-358) Aspartate beta-semialdehyde dehydrogenase {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}  ali model 3D-neighbors follow..  9  82..................................................................................................................YAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNXAAWNSVQIAETLHERGLVRPTAELKFEL................................... 155
5 -6.180d1ym0a_ b.47.1.0 (A:) automated matches {Worm (Eisenia fetida) [TaxId: 6396]}  ali model 3D-neighbors follow..  11  3....................................................................................................GGIEARPYEFPWQVSVRRKSGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSS----AASTVRQTHDVDSIFVNENYDDVSVIKTAVAITFD-INVGPICAPDPANDYVYRKSQCSGWGTI. 132
6 -6.070d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  14  35..............................................................................................................AIQQRAIMP---IIEGHDVLAQAQS-------------TGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDQIVVGTPGRVF 139
7 -6.050d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}  ali model 3D-neighbors follow..  15  3....................................................................................................NGYEAYTGLFPYQAGLD--GGSLIDNKWILTAAHCVHDA---------VSVVVYLGSAVQYEGEAVVNSERIISHSMFNDVALIKIPVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQS. 131
8 -6.030d3bera_ c.37.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  39..............................................................................................................KIQIEAIPL---ALQGRDIIGLAET-------------SGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQHIIIATPGRLI 144
9 -5.860d2j0ia_ d.144.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  14  52................................................................................................................KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG----GALTDIVTHTRMNEEQIAAVCLAVLQALSVL--HAQGVIHRDIKSDSILLTHDGRV. 155
10 -5.860d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  3....................................................................................................DGKMTRRGDSPWQVVLLDSKKKLACGAVLLTAAHCMDES---------KKLLVRLG--RWEKWELDLDIKEVFVHPNYSDIALLHLAVPICLPDSGLAERELNQAGQETLVT........... 129
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.