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Query: PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;, from HGM_OVER

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNILNNKNKRTSIFKALALCLFAAVSFTFVSCDDDMDIQQSYPFTVETMPVPNKVTKGQTVEIRCELKKTGDFANTLYTIRYFQFEGEGTLKMDNGITFLPNDRYLLENEKFRLYYTAQGDEAHNFIVVVEDNFGNSYELEFDFNNRNVKDDGVITVVPIGNFKPLTLast
1 -12.000d2q0zx2 b.1.18.22 (X:209-322) Protein pro2281 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  1........................................NIELSYEVV-DKDSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEG--DAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAGCDQEYKFSVDVKEA.................. 114
2 -11.600d1edqa1 b.1.18.2 (A:24-132) Chitinase A, N-terminal domain N {Serratia marcescens [TaxId: 615]}  ali model 3D-neighbors follow..  35.........................................................................NAADVSVSWNLWNGDTGTTAKNGKEAWSG---PSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVAD................... 109
3 -10.100d1wgoa1 b.1.3.1 (A:8-117) VPS10 domain-containing receptor SorCS2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  1...............................CEGGVDMQQS-GLQVSIQGEAVAVRPGEDVLFVVR-QEQGDVLTTKYQVDL----GDGFKAMYVNLTLTGE----------PIRHRYESPGIYRVSVRAENTAG-HDEAVLFVQV..................... 110
4 -9.690d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  1........................................HFPARVKVEPAGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPSGA-----------TECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVP................................. 98
5 -9.500d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}  ali model 3D-neighbors follow..  7.................................................QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTL-----EGAGLLSATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVVHKK.................. 101
6 -9.480d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}  ali model 3D-neighbors follow..  14  8............................................TLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHND------------GTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFT...................... 96
7 -9.410d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}  ali model 3D-neighbors follow..  2...........................................ICAPFTIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPD----VQGSVEPLMPGRQAKGQ--------AGTTPGRYRVGATLRTS-AGNASTTFTVTVGLLD................. 103
8 -9.100d1rlla4 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}  ali model 3D-neighbors follow..  10  5................................................LEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMV---EGSG--LLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE................... 99
9 -9.000d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}  ali model 3D-neighbors follow..  11............................................SFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITE----------QPDSYTATVVGNSVGDVTITPQVDTLILSTLQKKISLF...................... 101
10 -8.780d1qfha2 b.1.18.10 (A:750-857) F-actin cross-linking gelation factor (ABP-120) repeats {Slime mold (Dictyostelium discoideum) [TaxId: 44689]}  ali model 3D-neighbors follow..  1..............................GANGEDSSFGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAI--------------------------DNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLG...................... 89

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.