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Query: PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904;, from HGM_OVER

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKSRIISLGLVASLVCLLPQVAEAQIAASNPLEWTALAEGNELINGQIEKQIKGQTQTALLQNSIATEFNQIHKWEKQYNSYLKTASGYASSLKACTHLYNDGVRIFLTLGKLGKAIQNNPQGIVASMNMNNLYIETATELVSVFTLLNDAVAKGSNENMLTGAERSKTLWALNDQLSDFSRKLHLLYLSIRYYTFNDVWNNVTAGMLDRDNGEAARMALSHWHRAAALVLast
1 -6.910d3ldqb1 a.7.7.1 (B:151-260) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  7...................................................................................VELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMKILEEIDTLILPENFKDS--RLKRKGLVKKVQAFLAECDTVEQNI........................................... 108
2 -6.140d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}  ali model 3D-neighbors follow..  1..................................................................RKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKE--------RDDILRSLGEISALTAKLSDLRRHGKG----DSPEARALAKQIATSLQNLQSKTNRAVANTRPVK................................... 117
3 -6.130d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  10  30.......................................QAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGVVPLRALAGEKYESFKKWEKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADS----LIRNRASWIKAVSCLVV--DEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNVTEIAEWLDADYYVSDWR................. 202
4 -6.000d1w99a1 f.1.3.1 (A:84-276) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, Cry4Ba [TaxId: 1428]}  ali model 3D-neighbors follow..  1..........................................TPERVWNDFMTNTGNLID-QTVTAYVRTDANAKMTVVKDYLDQYTTKFNTWKREPNNQSYRTAVITQFNLTSAKLRETAVYFSNLVGYELLLLPIYAQVANFNLLLIRDGLINAQEWSLARSAGDQLYNTMVQYTKEYIAHSITWYMTIQVLDILALFASYDPRRYPADK.................. 193
5 -5.750d3rf3b2 a.24.9.1 (B:129-258) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  1..................................................................AEVRKIIRVCKGILEYLTVA----EVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML-MNTVKELLPVLISAMKIFVTTKNSKNQGIEERNFTVEKMSAEINEIIRVLQ............................................. 121
6 -5.710d3ok8a_ a.238.1.0 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  13.........................................AIYKSIMEQFNPALENLVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSSTLVQMSDTQRHLNSDLEVVVQTFHGDKLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNRLHAQMQAFVSESKRAAELEEKRRYRFLAEKHLL-QFLGRARGMLQNRVLLWKE..... 217
7 -5.700d1i4ta_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  1.........................................................SRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDA------FADLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSEDTLMTVKQYEAARLYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHR-DKYEKLRGDVAIKL........... 165
8 -5.600d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  1................................................................................................................................................MTTITGVVLAGGKARRMGGVDKKPLWQHVADALMTQLSHV--------------VNANRHQEIYQASGLKVIEDSLADYPGPLAGM 80
9 -5.560d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  10  18............................................KTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEE----------LKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKK............................................... 147
10 -5.540d1noga_ a.25.2.2 (A:) Hypothetical protein Ta0546 {Thermoplasma acidophilum [TaxId: 2303]}  ali model 3D-neighbors follow..  19  11................................................................................DELNSFIGYALVLSRWDDIRNDLFRIQNDLFVLGEDVSTGGKGRTVTREMIDYLEARVKEMKAEIGKIELFVVPGGSVAVSRRLERREINKNVLIYANRLSSILFMHALISNKRL................................... 142

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 6 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.