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Query: HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGFLast
1 -7.140[S] COG3007 Uncharacterized paraquat-inducible protein B  ali follow..  15  324MDQEGRLRADYKELDPEV----QNQVQQLWDQVTNDNIYQLTDFVGYKSEFNLFGFGIDGVDY.................. 383
2 -5.190[R] KOG3358 Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains  ali follow..  27  24VTCGSVVKLLNTRHNVRL--------SHDVRYGSGSGQQSVTGVTSVDDS............................... 66
3 -5.160[J] KOG0188 Alanyl-tRNA synthetase  ali follow..  13  106...GDYFKKEICSWAWEF-LTQRLALPKDRLYV--------TYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNF 174
4 -5.140[M] COG3047 Outer membrane protein W  ali follow..  20  162...............................YMVSENWMLNMSVWWMNIESDVKFNLAGEEHSINTRLAPWVFMFGAGYRF 211
5 -5.100[M] COG0750 Predicted membrane-associated Zn-dependent proteases 1  ali follow..  12  23.EFGHFVRVERFSIGFGKALWRRTDRYGTEYVIALIPLGGYVKMLDERAEPVAPELRRHAFNNKTVGQRAAIIAAGPVANF 109
6 -4.930[K] COG4008 Predicted metal-binding transcription factor  ali follow..  9  91MSTEEYMELKKKLSEELVG----------TSEPDTESVKALADAFDVTPEEAREALEDAGNDLRTAMKILRMKSL...... 155
7 -4.870[S] COG4029 Uncharacterized protein conserved in archaea  ali follow..  10  15IKQNEVTKYIVISSDIVLPADAAMKIYESEYPVTVKETCFGLIVTGPEKDVLAVVEKIRQLDKNHIFIKDRGFPAG..... 90
8 -4.720[S] COG3656 Predicted periplasmic protein  ali follow..  13  77IEDESGKTVRTLTVWVQQRRLNPRWLEESLRRWTRDNGQLVSTVSSATRNPGTYAVAWDGKTDKNALAPQGDYYVCVESG. 156
9 -4.660[M] COG1452 Organic solvent tolerance protein OstA  ali follow..  20  493...DDYTQTLEPKIQYLYPEKYQDNIDSTLLQTDYYGLFRSRKYSGVD-RIESANQVSYGASTRFFDSNYKNIAFGQIFYL 576
10 -4.650[S] COG5400 Uncharacterized protein conserved in bacteria  ali follow..  15  107....HPVFWQGPSLGLDY------GGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYLIRTGIGARLGINVG. 185
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.