FFAS03 results for HGC00166

Query: HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220`
#	Score	Template	Links and tools	%id	First	`MKEHKEVSALLQQAKQERRCCYGTSDAQRRALKRRLHAGELVSPYKNLYADRTLWNTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIASKSGIGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSS`	Last
1	-19.900	`[K] COG5340 Predicted transcriptional regulator`	`ali follow..`	14	45	`.......................APNTAREIASRLTEKGWLDRLLPGRYLIIPL-AAGEEAVYTTHEYLIASHVAEPMYIGYYSALSHHGL-TEQVPRTVYVVTPTRAQSREIHGVPYRVATVTEREPTSIEGVNVADLAKTLVDCADHPEYCG-------------GIRELATAMVAADDQACSWATVGEYLQRLDNGAATKRIVYLADQLSIDLPTRE...`	233
2	-6.110	`[I] COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase`	`ali follow..`	6	61	`........................DMSGIRGVDYIAKKGLLKKILAGSYPSGPSSAEPPLIWQMITNNEIPAYNIPSGILFDMHREAAARRPGVLTKVGLDTFVDPKRQGTAMNDKAREAPVV---KRVSFEGEDWLYFPAIAPQVAIIRATTADERGNLTYEHEGATLGGLDQALAARNNGGIVIAQVKRIAREGTLKPHDVRVPGVLVDYIVVDP......`	250
3	-5.360	`[QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein`	`ali follow..`	7	5	`.................................................................................................................................VLDPDKEESTMEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGG---DVAACKAATDAGAAAAQRIGELVSVHVI-----PRPHGDLEE`	98
4	-5.200	`[K] COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon`	`ali follow..`	8	1	`.....................................................................................................................................MRWETRREKIVSLLTES-REPLTIEEIAYMVGEDDKSKIIEDLEHIAKTLRREGKTLLMEPARCNKCGYVFKSLRVKPPSIQPPRFTIRE`	98
5	-5.190	`[R] COG0714 MoxR-like ATPases`	`ali follow..`	12	6	`.............................................................SVLTQNLSQTIVGKDEAIRLVLVALLSGGHALLEDVPGVGKTLLAKSLARSINGKFQRVQCTPDLLPTDITGTNIWNPSSREFEFLPGPAFANILLADEINRATPRTQAALLEVMEEKQVTVDGETRLVPFFVIATQNPIEY-------QGTFPLPEAQLD.`	161
6	-4.710	`[H] COG0502 Biotin synthase and related enzymes`	`ali follow..`	11	124	`....EKVTEIIKAVKSLGLETCGTFGLLQDGMAEDLKEAGLDYYNHNLDTAPEHYAEVIGTRRFDDRLSTLGKVRKAGL--KVCCGGIVGMNETRKERAGLIASLANLDPQPESVPINQLVKVEGTPLADAEELDWTEFVRTIA-VARITMPKSYVRLSAGRSG--MTEEMQAMCFMAGANSIFYGDKLLVTDNPEEDG-----DQLLMAKLDLEPETAENKK`	332
7	-4.450	`[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid`	`ali follow..`	6	1	`MPAPHGLSPLSKAFLMRRAFQRRILPHSLAMALSLPLAGYVQAQEVEFDIPPQ---ALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITE-LLRGTGASVDFQGNAITISVAEAADSSVDLGATMITSNQLGTPGTIATATRLVLTPRETPQSITVVTRQNMDD------FGLNNIDDVMRHTPGITVSAYDT-DRNNYYARGFSINNFQYD.`	220
8	-4.310	`[K] COG1675 Transcription initiation factor IIE, alpha subunit`	`ali follow..`	10	9	`..........................................................................................................................................VEELLNELVGRAAGEVGLILFSLGIEGEFTDDQLSLELGIEINEIRKAIGLADYVRRRDDETGWME...................`	80
9	-4.300	`[A] KOG3045 Predicted RNA methylase involved in rRNA processing`	`ali follow..`	10	116	`.KLKPELAQAALEAMEATSSTTPAANSLASKLQSELLGGRFRYINEQLYSTTSR-KAEALFRKDSSAFEAYHAGYRQQVEKWPINPLNRIIKTIKKIPKTAIIGDFGCGEGK----------LAQSVPNKVYSMDLVAARSDIINITDTPLQAR--TLDVAVYCLSLMGTDLNEFFLEANR-VLKLHGTVYIAEIQSRFQDVREFVRCLNACGFDLNKKDVAV`	325
10	-4.260	`[T] KOG2052 Activin A type IB receptor, serine/threonine protein kinase`	`ali follow..`	11	265	`..............................TLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRE-TEIYSTILLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWINGLV-KQGKPAMADLKSKNINGSCVIADFGLAVTHSHVTGQLDLGNNPKVGTKRAPEVLD--ESIDLECFEALRRTDIYAFGLVLWEV....`	470

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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