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Query: HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLLANTYNSSYYGTVSATVPSGWLIPFTWIKVGRLITADDELAHVRLLVPHTYGTTSASASVYACLYDIRFQAARLast
1 -27.600[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1  ali follow..  10  1MKQHRLAAAIALVGLVLSGCDSQTNIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDV--VTVHYEGRLTDGTVFDSSGSPIDLPVSGVIPGWVEALQLMHVGEKIK----------LYIPSELAYGAQSPSAIPANSVLVFDMELLGIKDPSKPDAEPEA............................. 239
2 -20.600[O] KOG0552 FKBP-type peptidyl-prolyl cis-trans isomerase  ali follow..  11  192....................SEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAEKLEQGPTGPAAKKEKQQASSNAPSSPKTRTLKGGVVVTDVKTGSGASATNGKK--VEMRYIGKLENGKVFDKNTKGKPFGRGEVIRGWDVGVAGMQEGGERK----------ITIPAPMAYGNQSIPGIPKNSTLVFEVKLVRVH........................................ 361
3 -16.800[O] KOG0549 FKBP-type peptidyl-prolyl cis-trans isomerase  ali follow..  7  25.....................................................................................DKLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSSRTTFTLGQGNVIKGWDQGLLNMCVG----------ERRILTIPPHLGYGERGAPKIPGNSVLKFDVELMKIDRDGEE................................... 138
4 -16.000[O] KOG0544 FKBP-type peptidyl-prolyl cis-trans isomerase  ali follow..  10  14...............VLPSWSNPDVGQFIVSTYNEYEYKRIPFRELEFGCLLCRMRTFNHEGMKKHLRDHVVHKKSSCEHEKPGKTGIHHQVDKAGNGVMPENGQL--VQCYIEIKLADCYTSWSNPIIFKIGFGEVIPGLDIGIPKMKVG----------EIATFHVSGKYGYGRAGFGLIPRNASLTCKVRLFNCSWDSYAKIGVDRILVQGDNVTKSKNGQTVTCHYV....... 224
5 -14.200[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance  ali follow..  10  2VKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSEGIETSLFLEKDGTWVMNE--RYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQF---NYTLEPAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLAPDTA...................... 222
6 -13.100[R] COG5633 Predicted periplasmic lipoprotein  ali follow..  9  1MRKGC-FGLVSLALLLLVGCRSHPEIPVNDEQSLVMESSLLAAG-ISAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHTIPAHSAVTLYGSANFLGAHKVR............................................................................................................................ 120
7 -12.800[N] COG5567 Predicted small periplasmic lipoprotein  ali follow..  14  1MKNVFKTLAVLLTLFSLTGCGLKGPL-------------YFPPADKNAPPPTKKVDSQTQSTMPDKNDRATGDGPSQVNY.............................................................................................................................................................. 67
8 -12.600[S] COG4808 Uncharacterized protein conserved in bacteria  ali follow..  11  8FNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTY-------QENVTIDMEKVDFKA...................................................................................................................... 121
9 -12.100[S] COG5510 Predicted small secreted protein  ali follow..  12  7MRSALITSILVAVAFLTSACNTMQGAGQDIQVAGKKLKDSAESNKPQKGCGCPHSSA..................................................................................................................................................................................... 63
10 -10.600[M] COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis  ali follow..  8  3LPDFRLIRLLPLASLVLTACTLPGHKGRQHQQEVRHLNQYQTRGAFAYISDDQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEEMIGKLTGMPI--------NSLRQWILGLPGDATDYKLDDQYRLSEVNYRQDGKNWKVVY----GGYDSKTQPAMPANMEL-------------SDGSQRIKLKM.......................... 201
11 -10.300[R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family)  ali follow..  11  1MKKS--VIALLGLAVILGGCSNKVSYGDAQAVETVNVDQKIAAEMVDSMMMSGSVSAITRDGRPIVFVERIKNKTSEHIDTESITDTISTKMLNSGKFRFVDMDRVEAVR................................................................................................................................ 114
12 -10.200[M] COG3056 Uncharacterized lipoprotein  ali follow..  11  33PNMFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDN--QIVTLTASRDLRFLLQEVLEKQMTARG---MVGPNGPVNLQIIVSQLYAD....................................................................................................................... 147
13 -9.060[S] COG4925 Uncharacterized conserved protein  ali follow..  8  10IKWMLICLGVFLLAILATGCIEQNNIDQRAISNQSE----------------------MNSSEKTVSTEPEHGLALSEMSVKITSQGHIATFQLYDTVAAKELYEQLPLELDLTNFRDAQWMFYPPKKLNATAQEAYHDGKKGELSYYDPWGDVFMLYEDFYAGDEMHRLGICINGIDEIVNMSGSM---QIEKNELSQEEGETKMRISIQANGETKAAKELYEQLPLTIDVE..... 225
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.