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Query: PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759], from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRILLast
1 -7.550[S] COG5418 Predicted secreted protein  ali follow..  24  1...........................................................................................................................MKVMKLIVVAPCLEYRTAIEVRKLIS-HILAYPCPEFE-QDIADFIGRVITEEKPDAIIFVGVKSPTCG............................... 110
2 -7.350[R] COG1407 Predicted ICC-like phosphoesterases  ali follow..  13  21................................................................................................................LFIVEGTPILYHKPSSTILFSD--------LHEQAMAEAGVFL--PRVQLRRAILTLDRVVMGLKPKKAVIV-------GDIKHAFDRLLKQEALETAGVDKVIVIRGN.. 124
3 -6.510[V] KOG4003 Pyrazinamidase/nicotinamidase PNC1  ali follow..  10  94.ALLVVDFQNDFVDGSLKIGDGDAGQEPSSAITPLNELLQLSS----------WDLVVYTKDWHPHNHISFLSQAHNSDRVMDEKDENKTLGFFDSVQFLKPIKTEQVLYPDHCIQKSWGSDIHPENAEYIGVDPYLDSYSAFNDNNGRSKT---------------ELEDLLRRENIDAVVIAGLAYDIC--VRFTCLDAVKQNFLAAVIPECSAGLTKK.. 293
4 -6.060[C] KOG3868 Vacuolar H+-ATPase V0 sector, accessory subunit S1 (Ac45)  ali follow..  12  358..............................................................................................PTNEQSVRIGVALMNTQIQLFNYQNPEKWVESAHFT-TEDCTGTFSSGSWMGIVSAAGLMFGYVMLQSVQTMDR----FDDPKQRQIVINVRE.................................... 451
5 -5.690[R] COG1779 C4-type Zn-finger protein  ali follow..  12  19...............................................................................................................MTAVTRVEKIPYFGEI-MESVLICERCNYDTLNARVVKSQSATIRIPELGSAGYISNIEGVVERAALKTALNLFEDDESKKKASKILEMLHEVREGVRKVTVIIEDPFGQ.. 159
6 -5.580[K] KOG3766 Polycomb group protein SCM/L(3)MBT (tumor-supressor in Drosophila and humans)  ali follow..  16  721......EEDADAMDDDTASEETGSELRDDQTDTSSAEVPSARPRRAVTLRSGSEPVRRPPPERTRRGRGAPAASSAEEGEKCPPTKPEGTEDTKQEEEERLVLESNPLEWTVT-----------DVVRFIKLTDCAPLA---FQEQDIDGQALL-----------------LLTLPTVQECMELKL-------------------GPAIKLCHQIERVKVAFY 889
7 -5.440[O] COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes  ali follow..  14  29................................................................................................................................................................AQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFV 91
8 -5.430[S] COG3689 Predicted membrane protein  ali follow..  6  110..........................................................DLAIQTSEGTTSQYLKPDTSSYFSKSAYEKEMRTAADKYLSQDSIQITNENYMEVMEAIYDYPDEFEGKTIQFTG--FVYNDPSHANSQFLFRFGIIHCRQYENNTWI-TAKGKLVNHYLEIDSFTKVDKP.................................. 262
9 -5.410[S] KOG3277 Uncharacterized conserved protein  ali follow..  11  32.............................................................................................................................EPQLSLSYTCKV-------------------CNSREGPKTFAKSS------------VVIVTCSGCHNHHIIADNIGWFEDFKGKNIEDHLKTRGEAV 102
10 -5.270[D] COG3115 Cell division protein  ali follow..  13  142..........................................................VSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQXGFIFGDYHR---SGPALFSLANMVKPGTFDPEMKDF----TTPGVTIF-MQVPSYGDELQNFKLMLQSA------QHIADEVGGVVL 301
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.