current user: public |
|
Query: PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MEGHEEVRTGWSRWDSLWPFLLFYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFLLPINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDKD | Last |
1 | -9.360 | [Z] COG5023 Tubulin | ali follow.. | 14 | 118 | ....DVIRREAEGCDSLQGFQITH------------SLGGGTGSGMGTLLISKIREEFPDRMDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSLVPFPRLHFFMVGYAPLTAIGSQSFRSLTVPELTQQ..... | 292 |
2 | -9.180 | [Z] KOG1376 Alpha tubulin | ali follow.. | 14 | 120 | ....DRVRKLADNCTGLQGFLVFN------------AVGGGTGSGLGSLLLERLSVDYGKKSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNA..... | 294 |
3 | -8.980 | [Z] KOG1374 Gamma tubulin | ali follow.. | 12 | 120 | ....DILDREADGSDSLEGFVLCH------------SIAGGTGSGMGSYVLERLSERFPKKLDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNLIPTPQLHFLMTG............................ | 272 |
4 | -8.570 | [Z] KOG1375 Beta tubulin | ali follow.. | 13 | 118 | ....DVVRKECENCDCLQGFQLTH------------SLGGGTGSGMGTLLISKVREEYPDRIDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNAMVPFPRLHFFMPGFAPLTRRGSQQYRALTVPELTQQ..... | 292 |
5 | -8.100 | [C] COG0680 Ni,Fe-hydrogenase maturation factor | ali follow.. | 21 | 1 | .................................MRILVLG-TDEAIGVRIVEALEQRLPDFVEILDGGTAGMNRDHLIIADAIVSKKNAPGTIMVLRDDEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVIPQSLEPHIGLTPTVEAMIEPALEQVLAALRESGVE. | 155 |
6 | -7.190 | [Z] KOG2530 Members of tubulin/FtsZ family | ali follow.. | 11 | 199 | ....DRLRFFVEECDHIQGIKFLV--------------DSGGFSAVAADFLENMADEYTN-VPVLLYSVRTPMSQMSSKKTVSNKLHDAISFSRLSSFCKLFT-PIGLASKFLNLGDEKPYRSSAVYAAALHSSTIPFR.................................... | 325 |
7 | -7.070 | [R] COG5628 Predicted acetyltransferase | ali follow.. | 14 | 19 | ...................................FIIARFQNKGVGRQVAKQIWQMHKRLWEVAVIPENKPALNDFKAFPYT............................................................................................ | 66 |
8 | -6.890 | [R] COG2910 Putative NADH-flavin reductase | ali follow.. | 21 | 1 | ................................MAKIALI-GASGNAGSRI---LKELSDRGHQVTAIARNPEKIAALPNVVAKKGVFDQAALSELLKGHDAVISSVHFTASD------PATLIEAVRASGVQRYLV....................................... | 95 |
9 | -6.350 | [R] COG1712 Predicted dinucleotide-utilizing enzyme | ali follow.. | 17 | 1 | ................................MLKIGIVG---GFIGGQICRAIDGGEVS-AELYALCDSSESKALELAASLKTCKPSYMKIEELIRGVDLII----ESASQNAVRFIVPQALKALADEELRDTLFGLAKEH................................. | 114 |
10 | -6.290 | [R] KOG2497 Predicted methyltransferase | ali follow.. | 16 | 147 | ........TGCSIWPSLSEFVLSFPELFANKACFEV----GSGVGMVGICLAHVKAK--DLLTLSNMKLNLERNHLNYDDEFLKQPGEAQSTRVKCTRPDIVLGA-DVIYDPSCLPHLLRVLVALLKNPPKRGNGS....................................... | 292 |
FFAS is supported by the NIH grant R01-GM087218-01
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6. |