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current user: public |
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Query: PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 | |||||||
# | Score | Template | Links and tools | %id | First | RFYCHEVVQRWISPDGKVTDMALLRGFLFCYCDVWALGSDMEVRPHNSLYDDVVARSCAYPKMRILPQLRRNGFKGDFHGISPVRLFKALLSDPRIETLMKGGEIEVMKHFLFNTRTADECWASYLIAKRHKYQIDNLSMWCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKA | Last |
1 | -9.040 | [R] COG5350 Predicted protein tyrosine phosphatase | ali follow.. | 15 | 67 | .....................................................................................................................................................................................................................................AHVLKLIDFAGEWDQSAPLLIHCWMGISRSPAAAVIAALSLYPD---------QDETELAQRLRTVSPYVTPNSRIIAIGDRLLGREGRLVKA | 150 |
2 | -7.140 | [NT] COG3143 Chemotaxis protein | ali follow.. | 9 | 1 | ..........................................................................................MMQPSIKPADEGSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLDYVVQMTAQAAERALNSVEASQPHQDAMEKEAKALTQRWDEWFDNPIELSDARELVTDTRQFLRDVPGHTS--------FTNAQLLDIMMAQDFQDLT--GQVIKRMMDVIQEIERQLLMVLLENIPEQSARPKRENESLLNGPQVDTSKAGVVASQDQVDDLLDSL.......... | 212 |
3 | -6.800 | [C] COG3245 Cytochrome c5 | ali follow.. | 9 | 50 | ...........................................................................................................................................................................................................................................VQAAPTGPRDGATVTFCTACHSAGISGAPKTG--RIAQGKDVLKNHALNGFNAMPPKGTCMD---SDDEIVAAIEHMIAGL...... | 135 |
4 | -5.990 | [G] COG2190 Phosphotransferase system IIA components | ali follow.. | 12 | 64 | ..................................................................................................................................................................................................................................TEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPIL-YLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK........... | 152 |
5 | -5.780 | [H] COG5031 Uncharacterized protein involved in ubiquinone biosynthesis | ali follow.. | 11 | 19 | ................................................................................................................................................FLADRALKPSNGNTDPVF---------DFEDALDQTEMAQLAVDELKKIPEVNTLFAERWLPAPFNLDDLAKLPEGTLGHVYDDISYLKMLWRSTHDIY-------HVVAGFDTDGIGEIGLQAFVLAQTPIPISVMLVSFGMVMTSLGSHTPRKLIAQKWDQFWDVPVIEIRECLG. | 218 |
6 | -5.780 | [R] COG3541 Predicted nucleotidyltransferase | ali follow.. | 12 | 211 | ....................................................................................................................................................................TLPDETLEYTQNLTNSRKDFIRLLQKSQNYQIALREWKAYLSWQENRNPARAEMERKSGFDLKHGMHCIRLLRSGLEILKTGE-----ITVDRRVAGDVEDLKAILQGEYSYQQV-MEMADDLVAQMDAAYEHSTIPHRPDLEAINNLCMELVEM... | 359 |
7 | -5.770 | [V] KOG1716 Dual specificity phosphatase | ali follow.. | 6 | 109 | ............................................................................................................................................................................................................................................DDAIKFLDQARVLVHCMSGKSR--SPAVVVAYLMKRKG----WRLAESHQWVKQRRPSTD--ISPGKYLDFGLETYLLFLKLLLIA | 191 |
8 | -5.770 | [O] KOG0823 Predicted E3 ubiquitin ligase | ali follow.. | 10 | 1 | ......................................................................................................................................................MDLDLNQE----PEELESAQERIQERIRQLEVIVSRIREREITTTTTPALVSPNEHRDSTAGVIHERSRERLVENGENKTYLIAKALNMEEKAEDG----HCFYQL----------PLIYLNIKECPVCDGEVTDAEVIPIYGNGDDCDGTKPKLED-------SLPPRPNA | 195 |
9 | -5.750 | [S] COG4876 Uncharacterized protein conserved in bacteria | ali follow.. | 15 | 7 | ..............................................................................................................................................DYPASLKNLEKPVRKKA------IDIANAMIDEGYEEGRAIPIATSKAKEWAENASTDEIDDFLTHDDETERDADPSSGSGPELMNKAEHVIKHKKGWAVKAEGA--KRVSEIKD--TKKEAIERAKEIAAHKGTEVIVHLADGSVQRKIKTGS.......................... | 150 |
10 | -5.670 | [M] COG1462 Uncharacterized protein involved in formation of curli polymers | ali follow.. | 15 | 88 | ..................................................................................................................................................................................................................................QTNRFNVLDRDNMSEIQQEQRLKG--VTEFGRKEVGDRQLFGIGKSQIAYAKVAVNISTSEVVYSTQGAGESTLNGKVLDLAMREAVNKLVNAVDS | 220 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |