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Query: PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete), from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ASAQAKQTVKVLEYCPAPGQFTNKLPEINNTMSAEERLKACEEQLEDGNLVCLGAAGGYITVALDQPIKNGKGSDIRILGNAFYSANDPKYGDATIGGSVEPGIVYVGVGSSPETAEWYELAGSEYYTTEMHRFEITYYKPTVETGEIKTPYITIDNYIRWTASWTNPDGSKQTAEGWQPKNVYHKQSYWPAWEENDQITFRGARLPDNAVNYGGDGSDPDNPQYWVSYRYAADSYGYADAAPNSDNVYTTFDLDWAVDSDGNPKHLDHADFIRIQSGVLQQCGWTGETSTEVGRITNLast
1 -5.070[L] COG5142 Oxidation resistance protein  ali follow..  16  129.............................................CTKSFLAFGGGNGRYSLWLDGSLEYAYSSRTPAFENN........................................................................................................................................................................................................................ 165
2 -5.020[M] COG3409 Putative peptidoglycan-binding domain-containing protein  ali follow..  13  38.......KVSAPVATNLNATKSKMFASTRTYGTSFGRYMTAQQVIDNGGIIQEGDTGEPVA-DIQRRLIYDDG----IFGSATYSAVVDFQRRIDREFHRNGYSDPLALDGIVGAQTWYYLK................................................................................................................................................................................ 148
3 -4.530[O] COG2077 Peroxiredoxin  ali follow..  7  32.............................................AKLEDTTLANFAGKRKILNIFPSIDTGICATSVRK------------NEQAAKLANTAVLCLSTDLPFAQARFCGAEGLENVFTVSTFRNKDVHKQLGVDIVEGPLAGLTARAVIVLDENNRV.................................................................................................................................. 143
4 -4.530[S] COG5294 Uncharacterized protein conserved in bacteria  ali follow..  11  59................................................................................................................................................................................................................................................................AYDENGKETEVT--AYLKLYIKEDKGVTSFEEVPEK...... 102
5 -4.440[H] COG0196 FAD synthase  ali follow..  7  15..............................................SGCALTIGNFDGVVVMLFEPHYLAQAKVDYVLFNENFASQTAEEFIEDWLVKKLNVRFLSIGDD---------RQGDFALLQKSGEAFGFFVEDNHSFCCDELRISSTAIREALAEDDLAYAEKMLGKPYRILGRVAHGNKLGRTIGFPTANIPLHRQVNPVKGVYAVKVRLKNQEIY------HGVANIGKRPTINGVVQLLEVHIFDFHSTIYGQCLEVEFCHKIRNEFKFPSFEALKEQIAQDVETAKH 304
6 -4.380[C] COG1927 Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase  ali follow..  10  6................................................GVLKMGAIGTALLVEY-DERADREDIEVRVVTSGAKMQPEEAVVAEKLKEFDPDVVIVVSPNAA--------LPGPKAAREAFEGKPVIVISDAPAKKAKDELKEKGFGYI-----INADSMIGARREFLDPTEMALFNADVVKVLAATGAFRLVQEAIDKVIEDIKAGKQPELPQIVVTAEKAVEAGKFSNPYAKAKA--AAFYIAEKVDVKGCFIEKDPEKYIPLVASAHEIAAILADQAREIEKSND 249
7 -4.330[S] COG5489 Uncharacterized conserved protein  ali follow..  9  1....................................MVRARKRRKRRLKMATIGTFGEIVTLSVQAKGVGDNAPSHRVVVGKAEIGAAWSKRSNEGRDY-----LGLKLDDPSFTA---PIYANLFADEEGEGHSLIWSRPNRRNGE....................................................................................................................................................... 121
8 -4.330[R] COG4691 Plasmid stability protein  ali follow..  37  133................................................................................................................................................................................................................................................................PTDADGKSSRLSR-SFVRILPGVFYR-------ST....... 161
9 -4.310[E] COG1280 Putative threonine efflux protein  ali follow..  7  12.......TFFFVSITPGMNMTLTLGMSVGYRRTLWMMVGELLGVALVAVSAVVG---AAVMLRYPDTLFKIVGASYLVYKLAINIEQENTYQGSDWGLLVQGFVTAIAN............................................................................................................................................................................................. 125
10 -4.240[L] COG5421 Transposase  ali follow..  12  131.............................................................................................................................................................................................................IPVHCLHADTTSVSVYGDYDDEETESIDITFGIP---KNGRWDLKQFVLSLIVNQHGIPL------FMNTHSGNSSDKNTILEAIQSLKSVAD 224
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.