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Query: PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSETKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSAMVKSLast
1 -6.820[O] COG4759 Uncharacterized protein conserved in bacteria containing thioredoxin-like domain  ali follow..  14  145.................IMVC--DVACSRFGYPIYQNLRQNYAAKSAGQLRVWRCSHI---GGHQF--APTLFDLPTGQ--FWGHIEPEILDVL---VWRNSPVKQLRQFYRGWSGMTKFEQIVEREIWMQHGWE...................... 255
2 -6.190[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs  ali follow..  53...........................PFIDRIGSKLSVMEQVLDVPTQEVITKDNASVSADAVAFYQVLNAAQAAYQVANLENALLNLTMTNIRSVM----GSMDLDELLSNRDTINDRLLHVVDEAANPWGIKITRIEIKDIAPPKDLVDAMARQ 178
3 -5.990[R] COG5084 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins  ali follow..  16  219...GKGAACRFVHEPTRKTICFLNGRCNKAEDC-----------------NLSHELDPRRIPACRYFLLGKCNNPNCRYVHI--------HYSENAPICFEFAKYGF--CELGTS---KNQHILQCTDYAMFG........................ 321
4 -5.910[C] COG1146 Ferredoxin  ali follow..  42................DYDKCVTCGIC--FVTC---RRVFDFDKKEGKVIVARPYNCMVACQTCMNLCPTGAISFPDASYIKKLVAQNKIVKKAFEIIKPLLAEDHLSPKET-ETKPEP...................................... 139
5 -5.880[O] KOG1752 Glutaredoxin and related proteins  ali follow..  13  43..........................................PVNQIQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELLLEYGNQFQDALYKMTGERTVPRIFVNGTFIRLHKEGKLLPLVHQCY........................ 141
6 -5.830[W] KOG1574 Predicted cell growth/differentiation regulator, contains RA domain  ali follow..  6..........................................................................NIDGLERSVSGVTDTTTSQIIYALAHATSQRGRFKYRNVERRLAPTDR--PLETLRKWREHAANVTF................ 75
7 -5.770[J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins  ali follow..  19  42...................................................................RKGKGVCLITGIEMNDAEL-----TKLAAELKKKCGCGG--AVKEGIIEIQGDKRDLIKSLLEAKGMKVK.................... 104
8 -5.700[C] KOG2621 Prohibitins and stomatins of the PID superfamily  ali follow..  11  96.................................YTKVDLRTVSFSVPPQEILTKDSVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNML----GTRSLSEILSDRETLAASMQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAE 215
9 -5.650[O] KOG4114 Cytochrome c oxidase assembly protein PET191  ali follow..  19  6...........KDQKKAVAICLQRSPCVMIEECLDNPELNKDLPEL---------AQMKAFLDCKRGIVDMTKRF-TGNAPLSTGKYDQQYENLCK------GKFDPREEMEKLKLLNSQQKD.................................. 108
10 -5.530[J] KOG4771 Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis  ali follow..  14  153..............................................................................................................SNKMLPLSAFEHAYIQRLINKYGTEDESMAKDVKLNSKLFNGSKLKN 200

FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 0 4 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.