FFAS03 results for PB018258

Query: PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MSETKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSAMVKS`	Last
1	-6.820	`[O] COG4759 Uncharacterized protein conserved in bacteria containing thioredoxin-like domain`	`ali follow..`	14	145	`.................IMVC--DVACSRFGYPIYQNLRQNYAAKSAGQLRVWRCSHI---GGHQF--APTLFDLPTGQ--FWGHIEPEILDVL---VWRNSPVKQLRQFYRGWSGMTKFEQIVEREIWMQHGWE......................`	255
2	-6.190	`[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs`	`ali follow..`	9	53	`...........................PFIDRIGSKLSVMEQVLDVPTQEVITKDNASVSADAVAFYQVLNAAQAAYQVANLENALLNLTMTNIRSVM----GSMDLDELLSNRDTINDRLLHVVDEAANPWGIKITRIEIKDIAPPKDLVDAMARQ`	178
3	-5.990	`[R] COG5084 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins`	`ali follow..`	16	219	`...GKGAACRFVHEPTRKTICFLNGRCNKAEDC-----------------NLSHELDPRRIPACRYFLLGKCNNPNCRYVHI--------HYSENAPICFEFAKYGF--CELGTS---KNQHILQCTDYAMFG........................`	321
4	-5.910	`[C] COG1146 Ferredoxin`	`ali follow..`	9	42	`................DYDKCVTCGIC--FVTC---RRVFDFDKKEGKVIVARPYNCMVACQTCMNLCPTGAISFPDASYIKKLVAQNKIVKKAFEIIKPLLAEDHLSPKET-ETKPEP......................................`	139
5	-5.880	`[O] KOG1752 Glutaredoxin and related proteins`	`ali follow..`	13	43	`..........................................PVNQIQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELLLEYGNQFQDALYKMTGERTVPRIFVNGTFIRLHKEGKLLPLVHQCY........................`	141
6	-5.830	`[W] KOG1574 Predicted cell growth/differentiation regulator, contains RA domain`	`ali follow..`	5	6	`..........................................................................NIDGLERSVSGVTDTTTSQIIYALAHATSQRGRFKYRNVERRLAPTDR--PLETLRKWREHAANVTF................`	75
7	-5.770	`[J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins`	`ali follow..`	19	42	`...................................................................RKGKGVCLITGIEMNDAEL-----TKLAAELKKKCGCGG--AVKEGIIEIQGDKRDLIKSLLEAKGMKVK....................`	104
8	-5.700	`[C] KOG2621 Prohibitins and stomatins of the PID superfamily`	`ali follow..`	11	96	`.................................YTKVDLRTVSFSVPPQEILTKDSVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNML----GTRSLSEILSDRETLAASMQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAE`	215
9	-5.650	`[O] KOG4114 Cytochrome c oxidase assembly protein PET191`	`ali follow..`	19	6	`...........KDQKKAVAICLQRSPCVMIEECLDNPELNKDLPEL---------AQMKAFLDCKRGIVDMTKRF-TGNAPLSTGKYDQQYENLCK------GKFDPREEMEKLKLLNSQQKD..................................`	108
10	-5.530	`[J] KOG4771 Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis`	`ali follow..`	14	153	`..............................................................................................................SNKMLPLSAFEHAYIQRLINKYGTEDESMAKDVKLNSKLFNGSKLKN`	200

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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