FFAS03 results for PB037276

Query: PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190`
#	Score	Template	Links and tools	%id	First	`MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL`	Last
1	-18.600	`[K] COG2207 AraC-type DNA-binding domain-containing proteins`	`ali follow..`	12	14	`.....................NLVKSGGGSYVEGSYRFDTLSNGISIHGGTVTARCDFCSSRLAEPYVSFVLLLEGSLDFGINRCRQIDADGGKIVLIAVGEEVLFSRYLYRGKTVKMTIKGMEQWLLRPEYARF-----------APLLYREPVRIWDLPPNLRGLAASCLKAVPKGETLRREADVLRL`	176
2	-7.100	`[R] COG3450 Predicted enzyme of the cupin superfamily`	`ali follow..`	16	75	`....................................................................EFCHILTGVIEITPDGGEAVTYRAGDSFVMKPGFTGVWKTIETVRKIYVT........................................................................`	124
3	-6.410	`[S] COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain`	`ali follow..`	9	24	`..................VAGRIRQRLGNFAGLKNVNLVQLEPGSFSALRHWHSHQ------------EFIYILAGELTLITDAGEEI-LTPGMAAGFPAGEANGHHLVNRSAVVGVYLEVGDRTPNDQ.............................................................`	124
4	-5.900	`[S] COG3123 Uncharacterized protein conserved in bacteria`	`ali follow..`	9	10	`...............................GKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEP----EEMTVVSGALKVLLPGTVEKVYTAGEVFN.............................................................................................`	72
5	-5.790	`[Q] COG3435 Gentisate 1,2-dioxygenase`	`ali follow..`	14	84	`........................................ITATLYAGLQLIMPGEVAPSHRHNQS--ALRFIVEGKGAFTAVDGERTPMNEGDFIL.............................................................................................`	138
6	-5.680	`[R] COG1741 Pirin-related protein`	`ali follow..`	10	1	`MKKVQGIYRAPR-QHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQHPHRGFETVTIVYHGEVEHRDSTGNGGIIGPGDVQWMTAEEFHSDAFAQKGGPFEMVQLWVNLPAKDKMTAPGYQAIRRE.................................................`	146
7	-5.660	`[GR] COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes`	`ali follow..`	9	241	`.................................GKVYIFKVSKTIASALVTVEPGAMRELH--HPNTHEWQYYISGKARMTVFASDTFNYQAGDVGYV--FAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWLAMLPETFKDFTDVLSKEKHPVVKKKCSK...........................`	385
8	-5.620	`[R] COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization`	`ali follow..`	11	49	`..................EKTRLWVIARPLSGFA--------ETFSQYIMEVQPGGGSDRAELDEGAEGVLFVVEGEVSVTV-AGKTHRLDEGGYAY.............................................................................................`	118
9	-5.410	`[PT] COG3712 Fe2+-dicitrate sensor, membrane component`	`ali follow..`	11	123	`.............................ATGAGERRIVALKDGSRLELNT---SHLEVRISSRERHVRM---LDGEALFMVSDQTRVDLLEGHVEVRGRDAGAGQAVTVSASGATLVRQPADRAAVNDWRAGRVTLTRARLDAAVAHINRYARKPLTLAEPALGDLVDGVFEARDTGTFARAVASLHNL`	315
10	-5.260	`[H] COG2243 Precorrin-2 methylase`	`ali follow..`	11	3	`.............ALPNANSRGKLVGVG--TGPGTLKAARALAEADVVAYFAKRGNNSNARAIVEARFRAEHLEAGKMVAVLSEGDPLFYGSYMHLHVRLAHRFPTEVIPGITAMSGCWSQTGVPIVQGDDVLTVLPGTMSEFELTRRLADTDAAVIMKVGRNLPKIRRALEVTGKLTRAVYVERGTMA.`	219

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster