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Query: HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;, from HGM_OVER

Results of PSI-BLAST search in nr85s
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# E-value Template Links and tools%idFirst MIMNPNILNKNPLMFFDRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGMGGLILEGTEAKILSDVVAQFYAYLSGCMFNDPVGMAIYAELHYMMSSLMLGEWFELast
1 2.000e-56UniRef50_A8R8S8 Uncharacterized protein n=75 Tax=root TaxID=1 RepID=A8R8S8_9FIRM  ali  96  1MIMNLNILNKNPLMFFDRAVNAQRSQLLTVMAEAVSECRTAADQAAELNETGQVGLLRLAEVWSTIRAKEGMGGLVLEGTEAKILSDVVAQFYAYLSGCMFNDPVGMAIYAELHYMMSSLMLGEWFE 127
2 7.000e-50UniRef50_A0A1E3AZQ9 Pseudouridine synthase n=16 Tax=Firmicutes TaxID=1239 RepID=A0A1E3AZQ9_9FIRM  ali  41  1..MKQNICELDTMIFFREALEAHEFMLLPVMASAVVECRTADKELKTLNEDGEIGLARLFSIWANMMCAPG-AATIVGCRPITMLSEILAQVHAYLTVHPLYDPEGLALYVELHHMMDAILMGDWFE 124
3 2.000e-47UniRef50_R9MSM8 Uncharacterized protein n=55 Tax=root TaxID=1 RepID=R9MSM8_9FIRM  ali  53  1..MTAQKIKHNPRLFLQRAMEIQRRQLLLAMADAVSECRTAESMAAELNRDGETGLLRLAEIWCCL--SPDTGGRIMEGRGAELLADVLAQVYACLVLRPLHTPAGMGLYVELLYMMEALMLGEWFD 123
4 5.000e-36UniRef50_A0A174RM78 Protein of uncharacterized function (DUF3851) n=1 Tax=[Clostridium] clostridioforme TaxID=1531 RepID=A0A174RM78_9FIRM  ali  29  1.........MDTSIFKQDALAKKKVSVLADTTLALSTFVQAQRVGARLNERGLAGILRLAELQSQLV--PDWDKDHFDGKALFILCSLLTE----LMLNVSSVPGDLAVYGELESMLEEIADGEWFE 112
5 2.000e-28UniRef50_A0A1C6GC91 Protein of uncharacterized function (DUF3851) n=1 Tax=uncultured Clostridium sp. TaxID=59620 RepID=A0A1C6GC91_9CLOT  ali  97  1.....................................................MGLLRLAEVWSAIRAKEGMGGLVLEGTEAKILSDVVAQFYAYLSGCMFNDPVGMAIYAELHYMMSSLMLGEWFE 74
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.