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Query: HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;, from HGM_OVER

Results of PSI-BLAST search in nr85s
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# E-value Template Links and tools%idFirst MIYLHARGLFHVLLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKAMQKELVTDMEEVLast
1 4.000e-51UniRef50_D4JSK0 Relaxasome subunit MobC n=33 Tax=root TaxID=1 RepID=D4JSK0_9FIRM  ali  98  1MIYLHARGLYHVLLLICNRELLFIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEAXXXXXXXXXXXXXXXXXXXXXKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKAMQKELVTDMEEV 136
2 2.000e-32UniRef50_B7AN47 Uncharacterized protein n=25 Tax=Bacteria TaxID=2 RepID=B7AN47_9FIRM  ali  97  29.........................KRKDEDDMAKSTKTYEERIRALEKKEQESIEAXXXXXXXXXXXXXXXXXXXXXKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFLKG............ 127
3 3.000e-29UniRef50_D4JD93 Relaxasome subunit MobC n=122 Tax=root TaxID=1 RepID=D4JD93_9FIRM  ali  79  1................................MAKSTKSYEERMLEMEKKERESLEKAKRYAAQKKELLKRKKAEESKKRTHRLCQVGGAVESVLGSPIEEEDIPKLIGFLKKQEANGKFFSKAMQKETNTDMEEV 104
4 1.000e-22UniRef50_A0A1Q6JGC8 Uncharacterized protein n=3 Tax=Clostridiales TaxID=186802 RepID=A0A1Q6JGC8_9FIRM  ali  64  147............................................................LFTDRMKIYSDTKVSDFINSITRLCQIGGAVESVLGSAIEEEDIPKLIGFLKRQEANGKFFSKAMQKEPVANTEEV 222
5 1.000e-14UniRef50_A0A1C5YD63 Protein of uncharacterized function (DUF3847) n=1 Tax=uncultured Clostridium sp. TaxID=59620 RepID=A0A1C5YD63_9CLOT  ali  54  5......................................................................QRSIEERKKRTHLLCQIGGTVEKVLDRPLVEEDVMRLLNFLNQQERNGKYFTRAMEKCPDTGSE.. 68
6 1.000e-13UniRef50_A0A173RAX6 Protein of uncharacterized function (DUF3847) n=2 Tax=Clostridiales TaxID=186802 RepID=A0A173RAX6_9FIRM  ali  55  1................................MARTQRSIEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTHLLCQIGGTVEKVLNRPLVEEDVMRLLNFLNQQERNGKYFTRAMEKCPDTGSE.. 102
7 6.000e-13UniRef50_A0A239R4U7 Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium TaxID=1898203 RepID=A0A239R4U7_9FIRM  ali  55  46..............................................................................ARTHRLITIGGVVEAVLGREFRDGDNKKLEIFLRTQERNGRFFTKAMEKEIPDDKE.. 101
8 2.000e-12UniRef50_A0A2N5NM78 Uncharacterized protein n=7 Tax=Clostridiales TaxID=186802 RepID=A0A2N5NM78_RUMGN  ali  59  31.......................................................................KSEDERKKRTRRLIELGGIVESVLGRDTTEEDKIRFLNFLKKQEVNGKFFSKAMNNSSVTD.... 91
9 2.000e-12UniRef50_A0A1G4R516 Conjugal transfer protein TraD n=4 Tax=Clostridiales TaxID=186802 RepID=A0A1G4R516_9FIRM  ali  56  31.......................................................................QSADERKKRTRRLIELGGIVESVLGRPTVDEDKIRFLNFLKKQETNGNFFTKAMNGK........ 87
10 3.000e-12UniRef50_A0A1H9LGJ1 Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium NE2001 TaxID=1520823 RepID=A0A1H9LGJ1_9FIRM  ali  51  46..............................................................................ARTKRLIQIGAIVEKELGRDFVDDDFRRLSYFLKMQERNGKYFSKAMEKDLPPEKE.. 101
11 8.000e-12UniRef50_A0A174XRN0 Uncharacterized protein n=1 Tax=Dorea longicatena TaxID=88431 RepID=A0A174XRN0_9FIRM  ali  97  1..........................................................................................MESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKAMQKELVTDMEEV 46
12 2.000e-10UniRef50_D4LLZ0 Uncharacterized protein n=3 Tax=root TaxID=1 RepID=D4LLZ0_9FIRM  ali  52  1................................MAKSTKSYEERMLEMEKKEQESLEKAKRYATQKKELLKRKKAEESKNEP-----IGSVRLAVQWNPF-------LVHLLRRKTSQS.................. 74
13 1.000e-08UniRef50_A0A0U1N2I9 Protein of uncharacterized function (DUF3847) n=3 Tax=root TaxID=1 RepID=A0A0U1N2I9_CHLTH  ali  50  33........................................................................STQERKARTKRLIEIGAVVESALGRPLEEKDRQKLSAYLKQSEEQGKYISKAIWGE........ 88
14 1.000e-06UniRef50_A0A1C5MTL2 Uncharacterized Fe-S center protein n=1 Tax=uncultured Clostridium sp. TaxID=59620 RepID=A0A1C5MTL2_9CLOT  ali  96  4.......................................................................................................LPKLIGFLKRQEKNGKFFSKAMQKELVTD.... 32
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.