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Query: PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;, from HGM_OVER

Results of PSI-BLAST search in nr85s
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# E-value Template Links and tools%idFirst MSIFANLFKKQADADAKVVGNVEDFVSLTRVYFQSVIAVNLGITNIRFLPDVANFKRLFKVATQGGKLGLAEKSASRKMLMQDYGISESFFKEIDTSIKKNCRTQNDVQAYLFMYQGFSSDLMMLMGNLMQWKFRMPAIFKKALRSMTEKTVHDVCTKTVWKADDVHKTAAAVRQYKERLGFSEQWMSEYVYNIVLLAKKEPKHKDEEAKALast
1 0.000e+00UniRef50_E6SWB1 Uncharacterized protein n=9 Tax=Bacteroidaceae TaxID=815 RepID=E6SWB1_BACT6  ali  81  1MSILAKLFNKNTEEVSSK--NVEDFVSLTRVYFQAVIAANLGITNIRFVPDVANFKRLFKIPTQGGRLGQAEKAASRKMLIQDYGISENFFKEIDASVKKHCRTQNDVQGYLFMYQGFSNDLMMLMGNLMQWKFRMPSIFKKALRSMTEKTVHDVCTKSIWKKDDVHKTAMNVRQYKERLGYSEQWMSEYVYNVIILA............. 196
2 0.000e+00UniRef50_UPI0009810DC2 hypothetical protein n=1 Tax=Prevotella ihumii TaxID=1917878 RepID=UPI0009810DC2  ali  49  1MGIFSKIFNSNKDEQEK-VGGMNDYMTLVRVYFQASLAAKLGITNLASLPDLRTYKQTFKVPTVNNKLGVGEKTSVRKTMKNLYGTSDLFFDEIDNSIKKNCKKLQDVQGYLYQFQAFSQDLMMLIGNLMKFKLRVPGFFNKIIYKMTEKTVDDIFTKNDFSDPAVIKSVMSIRQLSQRLGFSRQWCVDFVYQVVMLAKKEPRQGDDQANS 210
3 0.000e+00UniRef50_D9RRT6 Uncharacterized protein n=20 Tax=Bacteroidales TaxID=171549 RepID=D9RRT6_PREMB  ali  49  1MGFLSKLFGKN-DATQSKTGGMEDYMTLVRVYFQAVLATRLGINNLAMLPDLRTYKQTFRVPTLNNKLGPGEKASVRKTMKNIYNVDDNFFDEIDASIKKNCKKMQDIQPYLYQFQGFTQDLMMLVGNLMKFKLRVPGFFKKAIYTMTEKTVNDIYDKNSFSDPGVIKAVMSVRQYNQRLGFSRKWTTDFVYQVVSLAKKEPKPAEE.... 206
4 0.000e+00UniRef50_E0NS61 Uncharacterized protein n=199 Tax=root TaxID=1 RepID=E0NS61_9BACT  ali  51  10MGIFSNLFGKRGVGHAK-VGGMEDFMTLIRVYFQASLAAGLGITNLAVLPDLRTFKATLRVPTVNNKLGIGEKTHCKKMMKELYKMDDSFFKEIDRSIRRNCHKMQDAQTYLLQFQAFSQDTMMLMGNLMKFKLRVPSFFKKAIHSMTEKTVSDILNKNDFDDVGVMKTVIGIRKYNARLGFSQGWITEFVFHVVMLAKKEPKPADDGKK. 218
5 3.000e-98UniRef50_A0A255SUM1 Uncharacterized protein n=1 Tax=Prevotella sp. P5-92 TaxID=2024222 RepID=A0A255SUM1_9BACT  ali  45  1MSILSKILGRKDAEQQQKTGGMEDFMTLIRVYFQAAMAADLGITNLAALPDLRVFKTTLHVPTVNNRLGIGERTRCKKMLKDMYDIDDFFFKEIDSSLRKRCRRLQDVQTYMIQFQNFTQDLMMLLSNLMKFKLRLPSFMQKTLRSLINKTVDDIFNKNDYTDAAVLKTAVGVRQYAAKLGFSQQWTALFAEKVVMLAKKEPRPKDEDIK. 210
6 1.000e-93UniRef50_K5ZCP2 Uncharacterized protein n=17 Tax=Bacteroidales TaxID=171549 RepID=K5ZCP2_9BACT  ali  57  1MNFISKLFKKNSEAEEAGKGSVEEFVSLIRVYYQAVMAVNLGITNLNMLADMALFKRMLKIPTQNNKLGVAEKSRVRKVLMEDYGLSEAFFKEIDSSVKKNCKNQNDIKTYFFMFQGFCNDLFNLLGNLMQWKFRFSMLVKKLLYNMTTKTVHDILTKSEWKDISVQKAAWSVRKYAEKLGYSEQWITDFVYNVVLLAKEDQKKEFKKNK. 211
7 1.000e-92UniRef50_F3ZTI0 Uncharacterized protein n=193 Tax=root TaxID=1 RepID=F3ZTI0_9BACE  ali  65  1MGFFSKLFNKGSEE---AKGSAEDFMSLVQVYFQSIMAINNGITNIRAIPDVANFKRLFKIPTQKGRLGLAEKSAAKKMLMEDYNISENFFTEIDSSIKKNCRKPQDVQTYGFQFQGFTQDLMMLIGNLMQWKIRIPSAFKKTLYTMTEKTVHDISTKMIWKKDEIHKTASSVRTLKERLGFSEQWMTEFVFAILLL.............. 194
8 1.000e-91UniRef50_A0A1V5IU50 Uncharacterized protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V5IU50_9BACT  ali  53  16..................VGGLEDFMTLIRIYMQSEIAGNMGITNINMLPDLATFKRGLKIKTKGNKLGVAEKAQCKKMLAQMYGISESFFKELDTCIRKNCRNVNMLQPFMYQFQGFSSDLMMQVGTILKWRFRVPKFLKNALHTMTQDAVHKIMTVNSWKDEASYKTVFNIRQYQQQLGLSEEWMTEYAFNMICLAKREPRNKEN.... 204
9 1.000e-39UniRef50_R5CGU9 Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262918 RepID=R5CGU9_9BACT  ali  41  1MGFLSKIFGKNNNGEHK-TGGMEDYMTLVRVYLQAAIAETAGITNLAMLPDLRLFKTTLHIPTLNNKLGVGEKKHCKKMLQDLYKVEDSFFKELDQS.................................................................................................................. 96
10 6.000e-35UniRef50_J9D5C5 Uncharacterized protein n=1 Tax=gut metagenome TaxID=749906 RepID=J9D5C5_9ZZZZ  ali  77  1..............................................................................MLMQDYGLSEDFFKEIDTSVKKHCRTQNDVQGYLFMYQGFSNDLMMLMGNLMQWKFRLPSIFKGALRAMTEKTVMKYAPKQYGKK................................................ 85
11 1.000e-34UniRef50_W4PU78 Uncharacterized protein n=1 Tax=Bacteroides pyogenes JCM 10003 TaxID=1235813 RepID=W4PU78_9BACE  ali  83  1MGLF-DVFKKKSDKTQ--VGNVEDFISLTRVYFQSVIATNLGITNIRFLPDVANFKRLFKIATQNGKLGLAEKSASRKMLMQDYGISENFFKEIDA................................................................................................................... 93
12 1.000e-33UniRef50_R5C7Q8 Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262918 RepID=R5C7Q8_9BACT  ali  51  1..........................................................................................................................MMLMGNLMKFKLRVPSFMKKAIYSMTEKTVSDIFNKNDYNDAGVMKTVVAIRTYNKRLGFTEKWITDFVFQVVMLAKKEPKPSSDD... 86
13 1.000e-29UniRef50_J9G1Z2 Uncharacterized protein n=1 Tax=gut metagenome TaxID=749906 RepID=J9G1Z2_9ZZZZ  ali  56  2.......................................................................KKNKCKKMLMEIYGLNENFFKEIDQSIKHNCRNANDIRTYFIMFQGFSQELMMLVGNLMKWKFRVPGFIEKTLYVYSE.............................................................. 80
14 7.000e-27UniRef50_J9H177 Uncharacterized protein (Fragment) n=1 Tax=gut metagenome TaxID=749906 RepID=J9H177_9ZZZZ  ali  49  1MGFFSQIFKKEVNEIGWRVGGVEDFMTLIRVYYQAVMAANLGISNLAALPDLRVFKQTLHVQTVNNKLGLGEK.......................................................................................................................................... 75
15 5.000e-19UniRef50_B7BDH5 Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 TaxID=537006 RepID=B7BDH5_9BACT  ali  46  1....................................................................................................................................................QKTIHEIVTRSEWKDVGVQKVAWRIRKYKETLGYSEEWMTDFVYNVVLMAKEDAKRQKKEGK. 62
16 1.000e-14UniRef50_J9GM37 Uncharacterized protein n=1 Tax=gut metagenome TaxID=749906 RepID=J9GM37_9ZZZZ  ali  50  1...........................................................................................................................................................MNKNTWKQDDVRKACINIRQYQNKLRYSEQWMTDYVYNIIILAKKEPQNKEADNN. 55
17 8.000e-06UniRef50_J9GJN2 Uncharacterized protein n=1 Tax=gut metagenome TaxID=749906 RepID=J9GJN2_9ZZZZ  ali  78  1..........................................................................................................................................................................MTVRQYKERLGYSEQWMTEYVYNIIMLA............. 28
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.