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Query: TM0015 TM0015 281896 PDB-2007-09-14, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPVAKKYFEIRWHGRAGQGAKSASQMLAEAALEAGKYVQAFPEYGAERTGAPMRAFNRIGDEYIRVRSAVENPDVVVVIDETLLSPAIVEGLSEDGILLVNTVKDFEFVRKKTGFNGKICVVDATDIALQEIKRGIPNTPMLGALVRVTGIVPLEAIEKRIEKMFGKKFPQEVIDANKRALRRGYEEVKCSELast
1 -4.870sp|Q93073|SBP2L_HUMAN Selenocysteine insertion sequence-binding protein 2-like OS=Homo sapiens GN=SECISBP2L PE=2 SV=3  ali   11  4.............APTEQNVKLSAEV-NDNGSVSGVEPTPIPSY-------LITCYPFVQENQSNRQFPLYNNDI..................................................................................................................... 77
2 -4.360sp|Q9H7S9|ZN703_HUMAN Zinc finger protein 703 OS=Homo sapiens GN=ZNF703 PE=1 SV=1  ali   19  8..........RYHPYGKSHLSTAGGLAVPSLPTAGPYYSPYALYGQRLASASALGY........................................................................................................................................ 53
3 -4.350sp|Q9Y236|OSGI2_HUMAN Oxidative stress-induced growth inhibitor 2 OS=Homo sapiens GN=OSGIN2 PE=2 SV=1  ali   14  17.......FPVVIIGNGPSGICLSYMLSGYRPYLSSEAIHPNTILNSKLEEARHLSIVDQDLEYLSEGLEGRSSNPVAVLFDTLLHPDADFGYDYPSV............................................................................................... 106
4 -4.270sp|Q9HAT2|SIAE_HUMAN Sialate O-acetylesterase OS=Homo sapiens GN=SIAE PE=1 SV=1  ali   15  18MVLQKEPAGAVIWGFGTPGATVTVTLRQGQETIMKKVTSVKAHSDPMKPGGPFEVMAQQTLEKI................................................................................................................................ 88
5 -4.180sp|Q6NXP2|F71F2_HUMAN Protein FAM71F2 OS=Homo sapiens GN=FAM71F2 PE=2 SV=3  ali   7  7...................................................................QLIHSPEFNLFSNSVVFESNFIQTHVPEADFQVTKPGNWRDVCEGSAT--------ILGVTSSVPSLPLPNVLLMA................................................. 75
6 -4.170sp|Q86XR2|NIBL2_HUMAN Niban-like protein 2 OS=Homo sapiens GN=FAM129C PE=1 SV=2  ali   12  16.........................................................................................................................LDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARATELLDAVHAAVLAG. 88
7 -4.080sp|Q96T21|SEBP2_HUMAN Selenocysteine insertion sequence-binding protein 2 OS=Homo sapiens GN=SECISBP2 PE=1 SV=2  ali   8  7............REPESEGIKLSADV-LNVAWLESSEACVFPSS--------ATYYPFVQEPPVTEQKIYTE........................................................................................................................ 67
8 -4.000sp|Q8N5Q1|F71E2_HUMAN Protein FAM71E2 OS=Homo sapiens GN=FAM71E2 PE=5 SV=3  ali   11  27..................................................................QKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAM----------------GVAASLPGLVLPDILLIG................................................. 87
9 -3.950sp|Q8IYT1|FA71A_HUMAN Protein FAM71A OS=Homo sapiens GN=FAM71A PE=2 SV=2  ali   8  29..................................................................QRQLYKGEYDIFKYAPIFESDFIQITKRGEVIDVHNRVRMVTM----------------GIARTSPILPLPDVMLLA................................................. 89
10 -3.920sp|Q96KD3|F71F1_HUMAN Protein FAM71F1 OS=Homo sapiens GN=FAM71F1 PE=2 SV=1  ali   10  59.................................................................LCRVVHSPEFNLFLDSVVFESNFIQVKRGRNWRDVYKASNTMAL----------------GVTSSVPCLPLPNILLMASVKWHQG.......................................... 127
FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 2 9 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.