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Query: gi|108885076|ref|NP_072662.2| DnaJ domain-containing protein (MG_002) [Mycoplasma genitalium G37], from M.genitalium

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYDSMLKVNDFQNRIKNLDISVRWHENFMEELELRKNWEFDFFSSDEDFFYSPFTKNKYASFLDKDVSLAFFQLYSKGKIDHQLEKSLLKRRDVKEACQQNKNFIEVIKEQYNYFGWIEAKRYFNINVELELTQREIRDRDVVNLPLKIKVINNDFPNQLWYEIYKNYSFRLSWDIKNGEIAEFFNKGNRALGWKGDLIVRMKVVNKVNKRLRIFSSFFENDKSKLWFLVPNDKQSNPNKGVFNYKTQHFIDLast
1 -91.000[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain  ali follow..  17  5.DFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGG-------FGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEAC--DVCNGSGAKPGTSPETCPTCKGSGTVHIQQ--------AIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDGQRIRLSGEGGPGGAPAGDLYVTVRIRAHK---------IFQRDGLDLHCELPISFATAALGGELEVPTLDGK. 291
2 -86.600[O] KOG0715 Molecular chaperone (DnaJ superfamily)  ali follow..  18  48.NYYDVLGVSPKATREEIKKSFHELAKKFHPDTNRNAKRKFQEIREAYETLGNSERREEYDKLQYRNSDYVNNDGGDSERFRRAYQ-----------SNFSDTFHKIFSEIFENNQIKPDIRVELSLSLSEAAEGCTKRLSFDAYVFC--DSCDGLGHPSDAAMSICPTCRGVGRVT------------IPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPGGVESEATITIVGAGNVSTSQPGNLYIKLKVANDS---------TFTRDGSDIYVDANISFTQAILGGKVVVPTLSGK. 326
3 -83.700[O] KOG0712 Molecular chaperone (DnaJ superfamily)  ali follow..  19  6.KLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMS------------------ADDLFASFFGGGGGMPRGPRKGKDLVHTIKVTLEDLYRGKTTKLALQKKVIC--PKCSGRGGKEGS-VKSCASCNGSGVKFITRA----MGPMIQRMQMTCPDCNGAGETIEDRCKECDGAKVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIPGDVIFVIDQKEHPR---------FKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRW 286
4 -80.100[O] KOG0714 Molecular chaperone (DnaJ superfamily)  ali follow..  16  4.DFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNAEAKFKQISEAYDVLSDPQKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDI----------------------------FSEFFGFTRPSFGTGSDSRA--GPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLPC----SLEDLYKGVSKKMKISRDVLDSSGRPPVEEILTIEIKPGWKKGTKITFLEKGNEHGVIPSDLVFIVDEKPHP---------VFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRT 275
5 -77.600[O] KOG0713 Molecular chaperone (DnaJ superfamily)  ali follow..  15  17.DPYEVLCVSKDANDQEIKSAYRKLALKYHPDKNANASELFKEVAFSYSILSDPEKRRHYDNAGFEALDADGMDMEIDLSN------------LGTVNTMFAALFSKLGVPIKTTVSANVLEEAMNGTVTVRPLPIGTSVSGKVEKQCAH--FFGVT--------ISEQQAESGVVVRVTS----TAQSKFKLLYFEQDSSGGYGLALQEEREKTGKVTSAGMYFLHFQVYRMDTTVNALAAAKDPESAEGLQPCEVSELKAGTH----------IFAVYGDNFFKTASYTIEALCAKTYEDTTE..... 292
6 -76.400[O] COG2214 DnaJ-class molecular chaperone  ali follow..  20  5.DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAED--------FDDIFSSIFGQHARQSRQATRGHDIEIEVAVFLEETLTEHKRTISYN------------------------------------------------------------------PVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGGGPNGDLWLVIHIAPHP---------LFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKES. 236
7 -63.200[O] KOG0716 Molecular chaperone (DnaJ superfamily)  ali follow..  14  50.DLYDLLGIDRSSDKSQIKSAYRALQKRCHPDIAGDGHDMAIILNEAYQLLSDPISRQAYDKEQAKLEELRGYTGKPIYSVWCGPETEQRAAFVDEVKCVGCL-IETAYGRARVVAQWADPESKIKEAIEACPVDCISMVERSDLAPLEFLM------SKQPRGNVRIGVGNTV---GERVSNVFVDVKKFQERYA----KAMSRTTKETSQREVQISAVEAIRSISNWLYWRSSPYTKPLSPESNMSLTKRKKAVDPDIRKLQDVV---------AAMKQADQSGRTKEKGSAYLLGEDYWSPSNAALP 349
8 -58.500[O] KOG0691 Molecular chaperone (DnaJ superfamily)  ali follow..  15  6.EFYDVLGVSPTATEAEIKKAYYIKARQVHPDKNPNAAHNFQALGEAYQVLSDPGQRQAYDTSGKSGISTEIIDPAAFGSELFEEYIGQLAMASMASLDIFTEGDQIDTKRAVQKEREDKLAQILKDRLNLYMTNKDEFTSNAEAEVT--RLSNAAYGVEMLNTIGYIYVRQAAKELGKKAIYLGV-------PFVAEWFRTKGHFIKSQVTAATGAYALFQLQEEMKRQLSAEGNYTEKELEEYMKTHKKVMIDSLWKLNVADIESTISRVCEQVLQDPTAKREELRARAKGLKTLGKIFQ........ 329
9 -47.900[O] KOG0718 Molecular chaperone (DnaJ superfamily)  ali follow..  14  14.DYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAE------------IREEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQ--IEINKMHISQSIEAPLTATDTAILSG----SLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDL---QGPLFGLKLFRNLTPRCFVTTNCALQFS............................................................. 246
10 -46.900[O] KOG0719 Molecular chaperone (DnaJ superfamily)  ali follow..  13  31.DPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDARIEFDKVAIAYGVLSDKKRRKHYDKTGQLRETDADIDFD-----------------KEWLDELYQGVVSGETNEFKASYQYSEEEKCDVLKAYEKGKGSMDVI---------------------LEEVMCCEISDED-----------------RFRQVINNAIKDGKISKYKRFAPNEKKRKRRAKAAEREAQEAEELSMELNLKKRRKAGASDEEALSALIR-----SRQKSRMYNLISN............................... 260
11 -42.700[O] KOG1150 Predicted molecular chaperone (DnaJ superfamily)  ali follow..  24  67LNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEY................................................................................................................................................................................................................................................ 140
12 -41.900[O] KOG0720 Molecular chaperone (DnaJ superfamily)  ali follow..  12  408.DHYSALGLARNVDMAYLKREYRKKAMLVHPDKNMGAAEAFKKLQNAYEVLLDSVKQKSYDDELKREELLNYFRRFQNSSQKDTRGH-----------GFSGSGFGSSEGEGEEAFRECRQIACKKCGNLHAWFLTKKSKSTARW----CQDCKEFHQAKDGDGWVEQASQHVLFGLFQKV-----------DMPRAYVCADSKIYEASQWYICQGMRCPANTHKPSFHVNMNATAAKRGTSGSSGQKGRMPNTNPDETMTE-----------EEFYEWLQNAVQSGMFDNARENPSSATASSTSSSSSK 686
13 -41.000[O] KOG0717 Molecular chaperone (DnaJ superfamily)  ali follow..  32  28.CHYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDCTQQFRLLQAAYDVLSDPREREFYDRHRESILKGKNTDFE.......................................................................................................................................................................................................................................... 106
14 -40.700[O] KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains  ali follow..  30  124.DHYALLGLSNLATEDQIRKSYREAALKHHPDKLAEIESRFKAIQEAYEVLMDPTRRRIFDSTDEF.................................................................................................................................................................................................................................................... 199
15 -40.600[U] COG5407 Preprotein translocase subunit Sec63  ali follow..  12  98.DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNVEKHYIEITNAYRALTDDKTRENYALYGTPDVPQHISVGIALPKWISES--ENSIYILGFYGLVFGIVLPYAVGKWWYGSRTYTRDHVHVDTVDEWFPKMETSLTLDELLSLFASSKELTSLVPNEKNPK---------EYILKLLFDHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGFANPVDNV-LKLWQHIVQAIPLDAPFPLLQLPHLLMEDV---NLSIRNISSIPQFLSLSEEQTKDYLPNYSKNQLKEMREIANGIPRIS... 397
16 -40.600[O] KOG0721 Molecular chaperone (DnaJ superfamily)  ali follow..  12  98.DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNVEKHYIEITNAYRALTDDKTRENYALYGTPDVPQHISVGIALPKWISES--ENSIYILGFYGLVFGIVLPYAVGKWWYGSRTYTRDHVHVDTVDEWFPKMETSLTLDELLSLFASSKELTSLVPNEKNPK---------EYILKLLFDHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGFANPVDNV-LKLWQHIVQAIPLDAPFPLLQLPHLLMEDV---NLSIRNISSIPQFLSLSEEQTKDYLPNYSKNQLKEMREIANGIPRIS... 397
17 -38.100[JO] COG5269 Ribosome-associated chaperone zuotin  ali follow..  30  97.DLYAAMGLSKRATESQIIKAHRKQVVKYHPDKQSAQDGFFKIIQKAFETLTDSNKRAQYDSCDFV.................................................................................................................................................................................................................................................... 170
18 -32.200[O] KOG0723 Molecular chaperone (DnaJ superfamily)  ali follow..  21  96.EAGLILGVSPSAGKAKIRTAHRRVMILNHPDKG-GSPYVAAKINEAKDLLETTTKH............................................................................................................................................................................................................................................................. 150
19 -19.400[O] KOG2813 Predicted molecular chaperone, contains DnaJ domain  ali follow..  5  93..........QFLDEIEIRELLIDHIGHRCCWGSRPARTKIHAVEDCGTLDTFIEEREALTQTVPFTGGEFNGKKHGSEPGLW----------------------ELDLRPQFPTLFVPYKETQVLVPNSETVEKCT---GCTGRGDVVCPTCNADGEPGFYKMMKCSTCYGRGLVAHKDGSDTICTNCNGKGKLPCPTCQSRGLI---KCQTCDSTGSLLTSSIAVVKWKTLSKRKVSATRGAGSVPEDRAEGVQLCNTQAYQCTPAYFADSYFLNRFSSEVISLRAEVPPTANVVCERHTISVV.... 371
20 -18.600[O] COG1076 DnaJ-domain-containing proteins 1  ali follow..  27  3.QYFTLFRIEPDIDTENLEQTYRALAARFHPDKFASASAFEQKINDAYRTLKNPIDRAAY.......................................................................................................................................................................................................................................................... 71
21 -18.600[O] KOG3192 Mitochondrial J-type chaperone  ali follow..  18  86VDYFQIFGLEKEIDPGSLEGKYKDWQKKLHPDLVHNKSKKERDVTEACRTLTKRLSRAMY.......................................................................................................................................................................................................................................................... 155
22 -14.500[V] KOG0624 dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains  ali follow..  31  379.DYYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKFIDIAAAKEVLQDEEKRRQFDQ........................................................................................................................................................................................................................................................ 445
23 -14.200[L] COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain  ali follow..  5  1.............................................................................................................................................MRNTMIQSCNECKGKGYR-VKSYKICSACHGTGFRSTEDNSARQRFDLEDSHEVPCEVCRGKGEVVRETCPTCGGKGEVNICPSCGRMMKGRDEKEKVYILHPACTMDDLEVGSIYRGKITRVEK-------YGVFVSLNSHVWGLMRGLFPDYKVGDELFVRVSQVKP 178
24 -13.300[O] KOG0550 Molecular chaperone (DnaJ superfamily)  ali follow..  41  348KDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNLEAEARFKEVGEAYTILSDPESRRRFDS........................................................................................................................................................................................................................................................ 412
25 -9.300[R] KOG0431 Auxilin-like protein and related proteins containing DnaJ domain  ali follow..  17  861...WQPVSLTDLITAASVKKVYRKATLCIHPDKGANLQQKFDMLKEAWNKFNSEE............................................................................................................................................................................................................................................................... 922
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10.