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Query: gi|12044861|ref|NP_072671.1| hypothetical protein (MG_011) [Mycoplasma genitalium G37], from M.genitalium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGKIKLKNRKALVVYDNKDDFEKNQTFALSLIKELQKKKLNAEVLLLENKDINFEAKINEAELILNRSRKVDFLKTNNQINTFLVNPFNVVFIANDKYETYKWLKQNRFLTVNSSLLSKETIKSFPVIVKKRNSHGGKDVHLVNSADEIKHLNIENATEWIVQPFLSIGTVEYRAYILFGKIIKVIKKISNANQFKANFSQGAEVSLFKLKWFTKRKIKKIAKRLREGYYAIDFFLNRYNRVIVNEIEDAAGARALVQLCPDLNITKIIIRTIISKFKKFLKKKLISLast
1 -3.520PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  16  69..........................................................................................................................................................................................KKPHGKQTIKQLNAQGVQLSNIKITDENIKSFDRVARKYGIDYS------------LKKEVGADPPKYLVFFKAKDVDVMTAAFREYAGVELKKKQVK... 154
2 -2.490PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;  ali follow..  5  4......................................................................................................................................................................................LDVLFERLSRSSFRRRFRLGVQEQQYLANKGMETILEHGKDFIAQRLAPAEIPNDGKGHPVFLAQHATGTIEKWHRIEAGKSLSQEEQAYILDVIAHWLDLQK.. 116
3 -2.280HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  7  50..............................................................................................................................................................................GVSGLIQAQAAAGRSRAAADLAA-LGGATALSSIVAPGDPCEAASRVARANGAEVTTCSV----TGEDVVVEVSVEARVLGVSRPAVSSARAGPV.................. 139
4 -2.240PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  13  30.......................................................................................................................................YGRGFYCTRSIELAKEWACAGLDDGFANRYPPYTILNWLALLVENRYRADDSYFSFARTFVNNISLDQLADAMRLGELGKQIVLISSRAFALQFQDCEIARASTYHVLRNERDVTAR-EAYRRKSAEADIDGLFMRDIIREKVTNDDPR... 225
5 -1.900PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671;  ali follow..  9  7..............................................................................................................................................................................ALTMVMGMGSAVAFAQEPVKLPAMEQNQQTSQDKFTKITVKELPQVVKSTLSKDYEGTIVAEKENGKVYKIIVTAIKEDQSTEEITVLLNEKGEPVN................ 108
6 -1.880HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  7  1.....................................................................................................................................................................................................................MLNFHSKKVMCIQQEIYASHVVIVKKQRKHTYKANFSVATHMCRLFYREKTTSPNLETIIAKNLIPIRPDR... 83
7 -1.870PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  10  2........................................................................................................................................................................................AFLLPLEAMEYEINKGAGNPLEFKGLKSQYLGLVAVLLVVVILYIAGVNLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRK... 114
8 -1.800HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  7  1........................................................................LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMKHRDID------FHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEENELWQMDM-------HIREGSRYDGYFEKVAQRISEIM-------TDEIRETILRLKYE------TEKIIGVEYYQAVIRDGVRDYSG........ 185
9 -1.730PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  5  148....................................................................................................................................................................................................KGQASGSAFEDID----------MAVRTIKKDSPSEA--EMRHAGKVMTELDGTELYSRITERLTDEPMSERLAKAMAVFVDTVNTTV... 223
10 -1.720PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  12  13................................................................................................................................................................LSNFLLEGTIMKLTVYFDGTFWFALVEHVNRKGQYKFRYPFGKEPK----DSDIWNFIAKKLPSLIKKYDHIKTSSHADSIPQPKKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEK... 133
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.