FFAS03 results for 13507753

Query: gi|13507753|ref|NP_109702.1| hypothetical protein MPN014 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210`
#	Score	Template	Links and tools	%id	First	`MELRNTKLEQLFYIYHRNLKYRCPMQYLTKRGFNLQDLLSVGGGLAYLGEKQWLNLSLYNFNNQLVGFLSRKVGFEKKFLYLPINKPPSKSESFLGLKHLPTETNTIYLVEGDFDWLAFRKGGILNCLPLCGLTLSDKQMKFFQQSKIEKVVLCLDNDFAGKVAAANLERILKNAGFQVKVVQLKGKVKDWNELLLLYPKNWAKALRDHLAL`	Last
1	-66.900	`[L] COG0358 DNA primase (bacterial type)`	`ali follow..`	18	153	`.RGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSEDMLVTAVMGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGPKYLNSPETPIFHKGKELYGLYEVYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLLFRQ-TNHVICCYDGDRAGRDAAWRALENYLKSGNILKFLFLPDG-EDPDSYVRKYGKAFEQQVANATPL`	375
2	-29.800	`[L] COG1658 Small primase-like proteins (Toprim domain)`	`ali follow..`	14	4	`....................................................................................................KQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLERLKRLEKRGIIVFTDPDFQGERIRKI----IMQAVPNAKHAFLNRD-EARPKGKGSLGEALNQALAEVFGG`	117
3	-17.600	`[L] KOG2373 Predicted mitochondrial DNA helicase twinkle`	`ali follow..`	17	148	`.....................PEACAALGIKGLKEDQLNAIGAQ--WEPQQQLLHFKLRNAAQVEVGEKVLYLGDRREEIFQS-----SSSSGLLIHGAM--NKTKAVLVSNLIDFIVLATQNIETCLPYELKTLPQECLPALERF--KELIFWLHYDASHSWDAARAFALKLDER---RCLLIRPTETEPAPHLALRRLNLRHILAKATPV`	329
4	-12.700	`[S] COG4643 Uncharacterized protein conserved in bacteria`	`ali follow..`	11	628	`..........................YLKAKGITPQAGIYT------DSDGQKTYIPAIDSDGKQWTMQYIQEDGTKRFAKGGRKE------HPIGGLAAIAAAPVIVIGEGYATVAQVSQAGYGTVAAFDAGNLEGVAKALHKTFPDKPILIAGDDDNPGKTKAQEAARAFFPIFAPGEQADNPKGFTDFNDLATKSAEAVERQVHAAVS.`	817
5	-9.100	`[L] COG0353 Recombinational DNA repair protein (RecF pathway)`	`ali follow..`	15	23	`................................................KSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADTFTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGFSGRYFVLMGHLSDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAG--VEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI`	199
6	-8.190	`[L] COG3593 Predicted ATP-dependent endonuclease of the OLD family`	`ali follow..`	14	262	`.......LFEDPDARLHPRMVAIMWELVSY--LPVQRITTTNSVELLSQVNLNAICRLVRTPEKINCFQLRRKDLGKEDFRRLTFHI-NRSLALFS--------RMWILVEGESEVWILEMEGI-RIVEFAQSGLKP--LKYVQAMGIQWYVL-TDGDEAGKKYGEIVEDMLDEEMVRADRITILPKRDIEHFFYANGFADVFIRLAQ....`	461
7	-6.890	`[R] COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme`	`ali follow..`	11	58	`...........................................................PWRRKDVVYANERPVRSEKDIIEEAKIQDARGAGITGGDPLARLSRTVEYIR----LKEEFGKKFHIHLYTTGILASEEALEKLYDAGLDEIRFHPDLNSKFFEREIENMKKAFDFGWDVGGPAVPGFEDRIKWFASLLDKLGAKFLN.....`	207
8	-6.740	`[F] COG3363 Archaeal IMP cyclohydrolase`	`ali follow..`	11	2	`.................................................YLGRILAVGRNSNGSFVAYSSRSFPNRTTSIQEERVAVVPVRNPYIAYNCIRIVGDTAVVSNGHTDTIADKVALGMNLRDAIGLSLLAMDYE--DELNTPRIAAAINGSEAFIGIVTADGLMVVPEETPVYISTYEQTEPAATEFKAGSPEEAAEFILKG...`	173
9	-6.480	`[AR] KOG2191 RNA-binding protein NOVA1/PASILLA and related KH domain proteins`	`ali follow..`	13	53	`....................................................KVLIP-SYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSK----DFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTQVKIIVPNSTAGLKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEP--EQNRKAVEL`	239
10	-6.320	`[O] KOG2014 SMT3/SUMO-activating complex, AOS1/RAD31 component`	`ali follow..`	17	2	`...........................................................................DGEELTEQETALYDRQIRVWGANAQRRLTKAHILVSG----IKGTVAEFCKNIVLAGVTLMDDRLANMEALNANFLIPPDENVYSGKTVAEICSDSLKDFNPMVRVSVEKGDLSMLGT...................`	118

FFAS is supported by the NIH grant R01-GM087218-01

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