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Query: gi|13507752|ref|NP_109701.1| hypothetical protein MPN013 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKVISQKEFNILSRTKERVNFQIVYTKQRNGLHKAAKEYFFKDKDFTIIEDTPDTPDQPDGPCITKGPKEPGGPEEPNGPDKPEDPKDPDTPDVSEGPKEQGGQKDPGGPDDPSEGKQKVSKPDKYVTHRELDEKLKDFATKADFKRVEDKVDVLFELQKTQGEQIKVQGEQIKAQGKQIEQLTETVKVQGEQIRAQGEQIKAQSEEIKEIKVEQKAQGEQIKELQVEQKAQGKTLQLILKTLEKMNERLEKLESKLast
1 -3.790PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  36..............................................................................................................................................................TAGVRSADIEAKIRNDKNYANSEEYKKLMQERDESEAWARAATISFKADLNAEPATFVNQKTGKPAKVWIRTADVNYQSPRYFIAVKSL.......... 124
2 -3.440HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  8................................................................................................................................................................................PMARTATEKLEMRGQSVTVENIGKTVTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLVIGFILKFFIIL.......... 78
3 -3.020HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  33.....................................................................................................................................................................SVSDTFANKAASGGNVVSENTIAVHEQTDAYIAMPQLPYLPDAELAGMGGQLHSLTYSRIQRISTTEYIFSLKDWIDKLAQRAAVLSLHREK 124
4 -2.770HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali follow..  37............................................................................................................................................QQQKAENRNFIETYTITLTKGFAGDSTSIFINDSLLVNRTMTEEPFILEVKRFAEQSALMIVNNATEKLSLFELSEQGGEYRFEKEGEEVKPTGAGIKKLSKE.............. 139
5 -2.600PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;  ali follow..  2............................................................................................................................................................................NRLGKIVFGLGIAVCLFSATNSIAQVKTHSSLRAENLEVILVKDIQHISDTTHHTHAHDPHKSSYKILHVNFMLVSSDPSVTGYK 86
6 -2.500PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  110....................................................................................................................................................................RKHQSSRLVNVPKLKKHVFYGHVCVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTTIKA..................... 181
7 -2.300PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  89........................................................................................................................................................................QRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGNRKKRP....................... 154
8 -2.200PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  20.................................................................................................................................................................ANNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNT-LTEKQYSDYLRLMALTLRN 114
9 -1.780HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  1............................................................................................................................................................................................................................MTPYKVSHQLKKLNNSSSLTKKNMTMEENTVHPARKL 37
10 -1.640PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  16......................................................................................................................................................PASTRLTDAKVELRAMMEDAYADAIASGMTHNEAVGRVITDFGNLQEIAPVLGIADDLTAAEKAPQPEAAPAPAGTEGVGAPSRPRVTLPEAQ.............. 108

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.