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Query: gi|13507743|ref|NP_109692.1| DNA gyrase subunit A MPN004 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAKQQDQIDKIRQELAQSAIKNISLSSELERSFMEYAMSVIVARALPDARDGLKPVHRRVLYGAYTGGMHHDRPFKKSARIVGDVMSKFHPHGDMAIYDTMSRMAQDFSLRYLLIDGHGNFGSIDGDRPAAQRYTEARLSKLAGELLRDIDKDTVDFVANYDGEEQEPTVLPAAFPNLLANGSSGIAVGMSTSIPSHNLSELIQGLILLIDNPDCTINDLLGVIKGPDFPTGANIIYTKGIESYFETGKGNVVIRSKVSIEQLPTRAALVVTEIPYMVNKTSLIEKIVELVKAEEITGIADIRDESSREGIRLVIEVKRDTVPEVLLNQLFKSTRLQVRFPVNMLALVKGAPKLLNMKQALTVYLEHQLDVLIRKTQFNLKKYQERFHILSGLLIAALNIDEVIAIIKKSANNQVAMEALHERFGLDEIQARAVLDMRLRSLSVLEVNKLQTEQQELKALIEFCQQVLADKQLQLKLIKEQLTKINEQFGDPRRSEILYGISEDIDDEDLITQENVVITMSTNGYLKRIGVDAYNLQHRGGVGVKGLTTYTDDSISQLLVCSTHSDLLFFTDKGKVYRIRAHQIPPGFRTNKGIPAVNLIKIDKDEKICALISVNDYQNGYFFFCTKNGTIKRTSLSEFANILSIGKRAILFKENDVLFSVIRTSGQDDIFIGSTAGFVVRFHEDTVRPLSRAAMGVLGINLNQCEFVNGLSTSSNGSLLLSVGQNGIGKLTSIDKYRLTKRNAKGVKTLRVTAKTGPVVTTTTVFGNEDLLMISSAGKIVRISLEQLSEQRKNTSGVKLIKLKEKERLETVTIFKKEEAIKTTTATETDDVGSKQITQLast
1 -5.200sp|Q9H1B7|I2BPL_HUMAN Interferon regulatory factor 2-binding protein-like OS=Homo sapiens GN=IRF2BPL PE=1 SV=1  ali   21  3................................................VRDTLLTLAGCTPYEV---------RFKKDHSLLGRVFA--YPTGSGNVYSSASGVAKQM-----YQDCMKDFGRGLSSGFKYLEY-EKKHGSGDWRLLGDLLPEAVRF---FKEGVPGADMLPQMLPTALVS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 141
2 -4.540sp|P52951|GBX2_HUMAN Homeobox protein GBX-2 OS=Homo sapiens GN=GBX2 PE=2 SV=3  ali   18  2.............................................................................SAAFPPSLMMMQRPLGSSTAFDSLI-------------------GSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPPPPALPQAALQPALPPAHPHQIPSLPTGFCSSLAQGMAATLP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 109
3 -4.260sp|Q9NP60|IRPL2_HUMAN X-linked interleukin-1 receptor accessory protein-like 2 OS=Homo sapiens GN=IL1RAPL2 PE=2 SV=1  ali   27  3..............................................................................................................RCHVLDSQGLFGELQPIPSIAMTSTSATLVSSQADLPEFHPSDSMQIRHCCRGYKHEATTLPCNLPLTLLNG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 88
4 -4.080tr|E5RG91|E5RG91_HUMAN Uncharacterized protein OS=Homo sapiens GN=VPS37A PE=4 SV=1  ali   14  1....................................................................................................LAPTSTAFPYLYSNPSGMSPYASQGFPFLPPYPPQEANRSITSLSVADTVSSSTTSHAPSFGVLSNLPLPIPTVDASIPTS-------GFGYKMPPDAFPELSESLYNCEHFPTVVIFKESRYI---DISIGPKFTFTDSVKNILQTALCSIVVDVLFDFKVKTGSLRCICKNYPYQLTKAEKL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 188
5 -4.050sp|Q17R60|IMPG1_HUMAN Interphotoreceptor matrix proteoglycan 1 OS=Homo sapiens GN=IMPG1 PE=1 SV=2  ali   17  1.......................................................................................................................YHGTMEEDKQPEIYLTATDLKRLISKALEELDVGTIQFT---DEIAGSLPAFGPDTQSELPTSFAVITEDATLS...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 74
6 -3.940sp|A8MV24|CQ098_HUMAN Uncharacterized protein C17orf98 OS=Homo sapiens GN=C17orf98 PE=4 SV=1  ali   14  1MAYLSECRLRLEKGFILDGVAVSTAARAYGRSRPKL------WSAIPPY-NAQQDYHARSYFQSHVVPLRKTDQDHGGTGRDGWIVDYIHIFGQGQRY-LNRRNWAGTGHSLQQVTGHDHYNA---DLKPIDGF-----------------NGRFGYRRNTPALRQSTSVF-----------------GEVTHFPLF.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 154
7 -3.760sp|A4D263|CG072_HUMAN Uncharacterized protein C7orf72 OS=Homo sapiens GN=C7orf72 PE=4 SV=2  ali   16  2......DVEIQDTPGKISISKRSILSGTVENIDYPHYCDLLRKMNMPFVKG---LENRHNYGRFEK---KCNPAFLKFHPYPPSVLPDYHLH-----DPYPPPYGPHYPL-VTLGDSCSGFMSPGGD........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 116
8 -3.750sp|Q9H7S9|ZN703_HUMAN Zinc finger protein 703 OS=Homo sapiens GN=ZNF703 PE=1 SV=1  ali   14  6.....................................................................................LSRYHPYGKSHLSTAGGLAVPSLPTAGPYYSPYALYGQRLA-SASALGY................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 53
9 -3.660sp|Q6W2J9|BCOR_HUMAN BCL-6 corepressor OS=Homo sapiens GN=BCOR PE=1 SV=1  ali   16  1.......NPEPSFKANENGLPPSSIFLSPNEAFRSPPIPY-PRSYLPPAPEGI---------AVSPLSLHGK--------------GPVYPHPNGSLFPG--HLAPKPGLPYGLPTGRPEF----------VTYQDALGLGMVHPMLIP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 111
10 -3.650tr|F5H834|F5H834_HUMAN Uncharacterized protein OS=Homo sapiens GN=ANO4 PE=4 SV=1  ali   20  2.................................................RDGKCRIDYILVYRKSNPQTEKREVFERNIRAEGLQMEKESSLINSDIWEVLGRYAEQMNVRMPF..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 74

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.