current user: public
If you have questions about the server, please let us know.

Query: gi|13507750|ref|NP_109699.1|(removed signal:1-26) hypothetical protein MPN011 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .
# Score Template Links and tools%idFirst DLKNLIKETDGKDLDVSKLIITSEGKQILIGYLKKSYEVNSEKTTELLLNAWKQSAEKNEIGIDLFNWTKSIFSGVNTFNKKQKVEYFNMTYKGISDVSVKAKLNHTLTWNENYSYRGFNIHKGDKHYFNSFLTLKANSYLPFTSKNFDVYSKRIRLSVSFHWILKGKDELSQKILDKTVLNGYIEYIVDNYQINLFRYLVYLIELast
1 -7.120tr|C9JH90|C9JH90_HUMAN Uncharacterized protein OS=Homo sapiens GN=ANO10 PE=4 SV=1  ali   14  20.VIELAQDVKEETKEWLKNRIIAKKKDGVRRLLTSGFPLHDSEALKKLEDTWYTRFALKYQPID............................................................................................................................................. 87
2 -6.430sp|Q9HCE9|ANO8_HUMAN Anoctamin-8 OS=Homo sapiens GN=ANO8 PE=2 SV=3  ali   13  85.IRFWLQNLRAKQGEALHNVRFLEDQPIIPELAARGFPVHEQRILNRLMKSWVQAVCENQ................................................................................................................................................. 148
3 -5.870sp|A6NHZ5|LR14B_HUMAN Leucine-rich repeat-containing protein 14B OS=Homo sapiens GN=LRRC14B PE=3 SV=3  ali   17  6SLRFISAEALVSHPQVARQSLDSVAHNLYPLLFKASYLLEQAEVTRAVLGRWPLEEFR................................................................................................................................................... 63
4 -5.530sp|O75923|DYSF_HUMAN Dysferlin OS=Homo sapiens GN=DYSF PE=1 SV=1  ali   8  19.FQDKEYSIEEIEAGRIPNPHLGPVEERLALHVLQQQGLVPEHVSRPLYSPLQPDIEQGKLQMWVDLFPKALGRPGPPFNITPR......................................................................................................................... 102
5 -5.500sp|Q7Z4H7|HAUS6_HUMAN HAUS augmin-like complex subunit 6 OS=Homo sapiens GN=HAUS6 PE=1 SV=2  ali   20  1KLEELIDSLGSNPFLTRN--QIPRTPENLITEIRSS---------------WRKAIEMEE................................................................................................................................................. 43
6 -5.400sp|Q15111|PLCL1_HUMAN Inactive phospholipase C-like protein 1 OS=Homo sapiens GN=PLCL1 PE=1 SV=3  ali   10  1....MLRNIGLKTIDLREAIDMRENMQNAIVSIKELCGLPPIASLKQCLLTLSSRLITSDNTPSKDSFPYLEPLGAIPDVQKKMLTAYDLMIQESRFL........................................................................................................... 108
7 -5.220sp|A5YKK6|CNOT1_HUMAN CCR4-NOT transcription complex subunit 1 OS=Homo sapiens GN=CNOT1 PE=1 SV=2  ali   14  2.........................................REKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEAT----------------NTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFI. 148
8 -5.130sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2  ali   10  20.YNGKKFKLQSFEPKTPTVHGLGPKKERLALYLLHTQGLVPEHVTRTLYSHSQPGIDQGKVQMWVDIFPKKLGPPGPQVNINPR......................................................................................................................... 103
9 -5.120sp|Q5VXH5|PRAM7_HUMAN PRAME family member 7 OS=Homo sapiens GN=PRAMEF7 PE=2 SV=1  ali   10  8RLLELARQRLLRDQALAISTMEELPRELFPTLFMEAFSRRRCETLKTMVQAWPFTRLP................................................................................................................................................... 65
10 -5.120sp|A6NMC2|PRA24_HUMAN Putative PRAME family member 24 OS=Homo sapiens GN=PRAMEF24 PE=3 SV=1  ali   10  8RLLELARQRLLRDQALAISTMEELPRELFPTLFMEAFSRRRCETLKTMVQAWPFTRLP................................................................................................................................................... 65
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 1 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.