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Query: gi|13507753|ref|NP_109702.1| hypothetical protein MPN014 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MELRNTKLEQLFYIYHRNLKYRCPMQYLTKRGFNLQDLLSVGGGLAYLGEKQWLNLSLYNFNNQLVGFLSRKVGFEKKFLYLPINKPPSKSESFLGLKHLPTETNTIYLVEGDFDWLAFRKGGILNCLPLCGLTLSDKQMKFFQQSKIEKVVLCLDNDFAGKVAAANLERILKNAGFQVKVVQLKGKVKDWNELLLLYPKNWAKALRDHLALLast
1 -4.650sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1  ali   60......................................................................ENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGH-GVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGL.................................................. 150
2 -4.650tr|F5H7J5|F5H7J5_HUMAN Uncharacterized protein OS=Homo sapiens GN=RPTOR PE=4 SV=1  ali   60......................................................................ENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGH-GVPRPTVNGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGL.................................................. 150
3 -4.440sp|Q5TEA3|CT194_HUMAN Uncharacterized protein C20orf194 OS=Homo sapiens GN=C20orf194 PE=2 SV=1  ali   10  3...................................................................LGTYLTGGEGAYLYSSNLQSWPEEGNVHGLLFSHCRHRSIIISKDHMNSISFYDGDSTSTVAALLIDFKSSHLPVHFHGSSNFLMIALFPKSKIYQAFYSEV........................................... 111
4 -4.270sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2  ali   10  11...............................................PKCQARLFFPASGSVSIECTECGQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMGLSN---YHCKLLSPILARYGMDKQTGRAKLLRDMNQGEL---FDCALLGDRAFLIEPEHVNTVGY................................... 139
5 -4.240sp|Q8WUJ3|K1199_HUMAN Protein KIAA1199 OS=Homo sapiens GN=KIAA1199 PE=1 SV=2  ali   65.........................................................FHDVDGSVSEYPGSYLTKNDNWLVRHPDCINVPDWRGAICSGCYAQMYIQAYKTSNLRMKIIKNDFPSHPLYLEGALTRSTHYQQYQPVVTLQKGYTIHWDQTAPAELAIWLINFNKGDWIRVGLCYPRGTT....................... 196
6 -4.190tr|B0QZ77|B0QZ77_HUMAN MMS19 nucleotide excision repair homolog (S. cerevisiae) (Fragment) OS=Homo sapiens GN=MMS19 PE=4 SV=1  ali   13  25............................................................................................................VLQGLKALSLCVALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYNIITNFMRTREEELKSL----GADFTFGFIQVMDGEKDPRNLL................. 107
7 -3.870sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2  ali   10  7................................................................VISF-GYCSFSKSRILNTLLSPAQLKLHKIFLHQDLPLLVLPRQISDGLVEITWCFPDSFQKPVALAGNLESWTQFGFLMEVSSAVFFFTDCLGEKEWDLLM.............................................. 122
8 -3.750sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens GN=SIPA1 PE=1 SV=1  ali   11  8.........................................................................................................GVRAAPGARVAAGAQASGPEGIEVPCLLGISAEALVLVAPRDGRVVFNCACRDVLAWTFSEQQLDLYHGRGEAITL............................... 83
9 -3.720tr|C9JU11|C9JU11_HUMAN Uncharacterized protein OS=Homo sapiens GN=PLOD3 PE=4 SV=1  ali   11  61............................................................RSAEFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEMEEDMIIMFVDSY-DVI-----------------LAGSPTELLKKFVQSGSRLLFSAES..................................................... 146
10 -3.710tr|F5H3Q4|F5H3Q4_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   14  1....................................................................................................................VDLTRPSSCFFAASPGPAPASWQAQPLPPVGLYSPNICLTADSSGPASA............................................... 52

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.