current user: public
If you have questions about the server, please let us know.

Query: gi|13507754|ref|NP_109703.1| hypothetical protein MPN015 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .
# Score Template Links and tools%idFirst MAKIKLKNRKALVVYNKTDFDKNKHFAQALVDELNKKKLVGHILLLDDETADHKHIKNVELIINRSRRIDFLTKHNFLNSFLINPQNIVLVANDKYETYRWLKQHKFLTVDTTIFDPKKIKTFPIVIKKRDSYGGEDVHLIQNAEEIKQLPIQNPNEWIVQPFLSIGKVEYRAYILFGKVLKTIRRTASGDDFRANYSQNAAVDLFKLKWYIKHKIKRIAKKLGHGYYAIDFFLNKYNRIVVNEIEDAAGARALTKMCPDLNLPRVIIKSSLTHFKHHLKRQMIPLast
1 -4.700sp|Q9UPW5|CBPC1_HUMAN Cytosolic carboxypeptidase 1 OS=Homo sapiens GN=AGTPBP1 PE=1 SV=3  ali   9  2......................................................................................................................................................................................................................................SVTNIKLGRKAFIDANGMKILYNTSQECLAVRTLDPLVNTSSLIMRKCFPKNRLP 56
2 -4.550sp|Q9P2T0|THEG_HUMAN Testicular haploid expressed gene protein OS=Homo sapiens GN=THEG PE=1 SV=1  ali   14  7.............................................................................................................................VLKDRKGRCGKGYAWISPCKMSLHFCLCWPSVYWTERFLEDTTLTITVPAVSRR.......................................................................................................... 60
3 -4.350sp|A5YM72|CRNS1_HUMAN Carnosine synthase 1 OS=Homo sapiens GN=CARNS1 PE=1 SV=3  ali   14  71...........................................................................RDLTCPTGASAELARLLEDRLLTRQLLAQGGVAVPATLAF----TYKPPGLLRGGDASLGLRLVELSGKEGQETLVKEE-----VEAFLRSEALGDILQVA----------KLSGWRWR-----GRQAWRLHPRAELGAVVDTVLALLE--------KLEEEESVLVEAVYPPAQLPCSDGPSPGPGLAVRICAVVCRT........... 239
4 -4.200sp|Q16538|GP162_HUMAN Probable G-protein coupled receptor 162 OS=Homo sapiens GN=GPR162 PE=2 SV=1  ali   8  1...................................................................................................................................................................CERYRADVRT--VWEQCVAIMSEEDGDDDGGCDDYAEGRVCKVRFDANGATGPGSRDPAQVKLLPGRHMLFPPLERVHYLQV---PLSRRLSHDETNIFSTPREPGSFLHKWSSSDDIRVLP 117
5 -4.150sp|A5YM72|CRNS1_HUMAN Carnosine synthase 1 OS=Homo sapiens GN=CARNS1 PE=1 SV=3  ali   21  1................................................................................................................................................................................................................................TDFLGVDFALTAAGTPVALELNG...................................... 26
6 -4.070sp|Q6ZP01|RBM44_HUMAN RNA-binding protein 44 OS=Homo sapiens GN=RBM44 PE=2 SV=2  ali   7  30...................................................................LLQPCKDCQTSWTSVFDDSIISACGYYESLQNTADSALDFSAMPKIAVRDNQAIEDNTSLKVAHSS-KKTCFHNIGEMCTKSLTDAASCTVTINQTVDVST-DFRA................................................................................................................ 136
7 -4.010sp|Q66K74|MAP1S_HUMAN Microtubule-associated protein 1S OS=Homo sapiens GN=MAP1S PE=1 SV=2  ali   11  6............................................................................NLGVVFFNACEAASREDEAELALSLLAQLGITPLPLSRGPVPAK---PTVLFEKMGVGRLDMYVLHPPSAGAERTLASVCALLVWHPAGPGEKVVRVLFPGCCLLDGLVRLQH................................................................................................ 123
8 -3.980sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3  ali   8  1.............................................................MWLKPEEVLLKNALKLWVTQKSSCYFILQRRRGHGEGGGRLTGRLVGALDAVLDSNARVAPFRILLQVPGSQVYSPIACGATLEEINQHWDWLEQNLLHTLSVFDNKDDIASFVKGK--VKALIAEETSSRLAEQEEEPEKFREALV............................................................................. 145
9 -3.480tr|C9K020|C9K020_HUMAN Uncharacterized protein OS=Homo sapiens GN=WDR6 PE=4 SV=1  ali   12  11...........................................................................RATSELILLPVTGLECVGDRLLAESGFGFPKCPDYRREPPHPAETKDF--LRFKLQDCEGPDVLVYSLDFGGHLRMIKRVQNLLGHYLIGDLDLEAMVAVFGSKGLRVVKISWGQGHFWELWRSG..................................................................................... 143
10 -3.430sp|Q969F9|HPS3_HUMAN Hermansky-Pudlak syndrome 3 protein OS=Homo sapiens GN=HPS3 PE=1 SV=1  ali   7  21...........................................................................EPDRFCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFSTLGR-------VLRLAYSEAGDYLVAIEEKNKATFL-----RAYVNWRNKRTENSRVCIRMIGHNVEGPFSKAFRDQMYIIEMPLSEAPLCISCCPVKGDLLVGCTNKLVL------KYQIINEEFSLLDFERSLIIHIDNITPVEVSFCVGYVAVMSDL........... 204
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 8 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]