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Query: gi|13507759|ref|NP_109708.1| helicases MPN020 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTIAEIRKFAQTTQKFVEAENLFEHGNVVLPKKYLNKARGMAEVLYNSQVIKVSFTAKDGELTCKCSCLANVDNCVHIVAVLLKYHQMLVESKRSFNLAEAFHLDCDQAEMLIENLSLEIIAGGWNFKLGFTINLDKHNPQPSVLRFYCCDATFVYFLHLENDTLHSVELSKFKPEERATLLFFDKLCKQFTVGYDRNSLLFPLAGFLKELQANTEPTIFVFNDDKIDNILFLRISKKHHGLNHVCGFSGKKVFDFVTYKQKEKQIVLRSAYLSKFTDFKFPYTINIYKLQFGEPLFFYFLIQLKRDGFKNFYFQSEDSIVKEKEYLPKLYFKVEYDPVKNKFVSDAFFKYKNHFNKGTTTVYPHRYYMAKKSDRGGFNRLLFYEEAVENFYQDQFDLGYFRKFEHLPIQDKNQIEAFKAALDDLMPVDLAEVSLSDNLLHQKPLHFALSDLEAVAVDDKQIKLSFAPSAVELKLIKRILSAYHKGNVVCIDQESWYDLKQPAAKELIQFWNQFDLRNATSDGNHIYLPKYYLFEVAKIFSQYLDIKNLFDVPTIKKIEDQNNNVFDLSLEHKKITSLRNYQQEGVKWIRGLEENKFGGILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASLLLNWKSEFEKFAPQIKVKVANIPSKERGELYEKLTNEILIVSFNVLRSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLPSFLGNKKQFTDQFEKEKTDQSFHLLMQRTSPFILRRTKSKVLKELPNKITTDIYVELNPMHQKLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCSLPKNSQGILENSAKKEAALEIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDVNFFESLTNEELLRLFELast
1 -13.600sp|Q9HCJ5|ZSWM6_HUMAN Zinc finger SWIM domain-containing protein 6 OS=Homo sapiens GN=ZSWIM6 PE=2 SV=2  ali   19  2..........ETRLPFRRGIALLESGCVDNVL--QVGFHLSGTVTEPATVCNVAISFDRKITSVTCSCGNKDIYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 106
2 -8.420sp|Q9H7M6|ZSWM4_HUMAN Zinc finger SWIM domain-containing protein 4 OS=Homo sapiens GN=ZSWIM4 PE=2 SV=3  ali   12  53LGYPPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFH--LSGNIREPERLYHVSISFDRCKISVSCGCDNRDLFCAHVVALSLYRIRHAHQVELRLPISETLSQMNRDQ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 167
3 -8.330sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2  ali   16  2..............PFRRGIRLLDSGSVENVL--QVGFHLSGTVTEPAVTYKVAISFDRKITSVTCGCGNKDIFCAHVVALSLYRIRKPDQVKLRLPISETLFQMNRDQ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 102
4 -4.520tr|C9J7R7|C9J7R7_HUMAN Uncharacterized protein OS=Homo sapiens GN=DNTTIP1 PE=4 SV=1  ali   20  1...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GDAG----AAGQLVLTNPW-NIMIKHRQVQRRGRRSQMTTMDLLRAVLQPSINEEIQTVFNKYMK-AKLLFSDGEKVIPRLTHE....... 86
5 -3.850sp|A6NFU0|F187A_HUMAN Ig-like V-type domain-containing protein FAM187A OS=Homo sapiens GN=FAM187A PE=3 SV=1  ali   10  1...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NSEGMVATFQDKGQEPFADEYYGHLHVFTTFWTPCDRCGVRGEQWRIGL--------YLQSPDLSPRYLKAVPDVVSCGSRAVPRKLRTKARDHTPEVL.... 94
6 -3.720sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3  ali   9  2............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TLQHRYSEHTQLQTQQRAVQEAIQVKQWITHYQAAFNNLEATQLASLLQEI-----------STQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGALLQQRRSVLRGCLEQ-LHHYAT--EQWKTWMEE------LICNTTVERCQELYRKYEMQYAPQPPPT-------CQFITATEMTLQRYAADINSRLIRQVERLKQEAVTVPVCEDQLRCIKVFLHENGEEGSLSLASVIISALCTLTRRNLMMEGAASS-AGEQLVDLTSRDGAWFLEELCSMSGNVT-QLLKQCHLVPQDLDIPNPMEASETVHQIIFPEALRCLEYTLESMLHELDGLIEQTTDGVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARLLHA----GELIQPRNGSVDE--------TPKMSAGQMLLMFAQVETAFSLLVEKLNKMEIPIAWRKIDIIREARSTQVNFFDDDNHRQVFLKRLQT--KTLSGSSSLEDQNTVNGPVQIVNVKTLFRNSCFSEDQMAKPIKAFTADFVRQLLIGISALGVDIIAQVEAKDFGAESKVSVDDL..... 608
7 -3.610sp|P57076|CU059_HUMAN Uncharacterized protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1 SV=1  ali   13  7.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKE......................................................................................................................................................................................................................................................... 86
8 -3.610tr|F8VZ95|F8VZ95_HUMAN Uncharacterized protein OS=Homo sapiens GN=C21orf59 PE=4 SV=1  ali   13  7.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKE......................................................................................................................................................................................................................................................... 86
9 -3.610tr|C9J818|C9J818_HUMAN Uncharacterized protein OS=Homo sapiens GN=C21orf59 PE=4 SV=1  ali   13  7.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKE......................................................................................................................................................................................................................................................... 86
10 -3.530sp|Q8NG08|HELB_HUMAN DNA helicase B OS=Homo sapiens GN=HELB PE=1 SV=2  ali   13  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IDAEELCSGGVKAGSLPGCLRVSICDENTQETCKV------FGRFPIT----------GAWWRVKVQVKPVVGSRSQVQGFPSYFLQSDMSPPNQKHICALFLKECEVSSDDVNKEVSNYKNLNFENLRET.. 124
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 7 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.