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Query: gi|13507748|ref|NP_109697.1| hydrolase MPN009 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEYFDAHCHLNCEPLLEQHEKSLANFRLIGLKANVVGTNLTNSQIAVNLAKQHPDLLKAGVGIHPNDVQLFDLKAAQATLKKLVSTHRSFISCIGEYGFDYHYTKDYITQQEQFFLMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQPVVFHCFSEDTNTALKLLTLREVGLKVYFSIPGIVTFKNAKNLQAALSVIPTELLLSETDSPYLAPVPFRGKTNWPECVVHTVQTIADIKQVPLAEIKQAIVHNAKKLFWLast
1 -104.000d1j6oa1 c.1.9.12 (A:0-255) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  29  1..MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVVGVNLEDSKKSLDLSKTSDR-IFCSVGVHPHDAKEVP-EDFIEHLEKFAKDEK--VVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAYSEAYEILRTESPEKRGVIHAFSSDYEWAKKFID-----LGFLLGIGGPVTYPKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLGVPEAKVDEATTENARRIFL 252
2 -104.000d2gzxa_ c.1.9.0 (A:) automated matches {Staphylococcus aureus [TaxId: 196620]}  ali model 3D-neighbors follow..  30  1..LIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVGFNKSTIERAMKLIDEYDF-LYGIIGWHPVDAIDFT-EEHLEWIESLAQHPK--VIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHEEVGGIMHSFSGSPEIADIVTN----KLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFN 253
3 -102.000d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  25  3CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIPATEAENFARVLALAENYQP-LYAALGLHPGMLEKHS-DVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQ-----LGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFN 257
4 -101.000d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  32  1MFLVDSHCHLDGLDYEKDVDDVLAKAAARDVKFCLVATTLPSYLHMRDLVGERDN-VVFSCGVHPLNQND---PYDVEDLRRLAAEEG--VVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKTDCGGVLHCFTEDRETAGKLLD-----LGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFH 255
5 -99.600d3rcma1 c.1.9.0 (A:1-268) automated matches {Pseudomonas putida [TaxId: 160488]}  ali model 3D-neighbors follow..  25  1MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLTGTSLAVSEQALELCQQLDASLFATAGVHPHDAKAWD-TDSERQLRLLLSEPR--VRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDYRDHTGAVVHCFTGEREALFAYLD-----LDLHIGITGWICDRRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQ 263
6 -94.900d2y1ha1 c.1.9.0 (A:5-272) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  2VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQKDLDVALPIIENYKDRLLAIGEVGLDFSPRGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGA-EKVLLHAFDGRPSVAMEGVR-----AGYFFSIPPSIIRSGQ--KQKLVKQLPLTSICLETDSPALGP--EKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF. 261
7 -81.200d3gg7a1 c.1.9.0 (A:2-242) automated matches {Deinococcus radiodurans [TaxId: 1299]}  ali model 3D-neighbors follow..  21  1...IDFHVHLD---LYPDPVAVARACEERQLTVLSVTTTPAAWRGTLALAAGRPH-VWTALGFHPEVVSERAAD-------PWFDRYLPETRFVGEVGLDGSPSLRGWTQQFAVFQHILRRCEDHGGILSIHSRRAESEVLNCLEANPRSGTPILHWYSGSVTELRRAIS-----LGCWFSVGP--TMVRTQKGAALIRSMPRDRVLTETDGPFL---ELDGQAALPWDVKSVVEGLSKIWQIPASEVERIVKENVSRLLG 240
8 -27.000d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  13  5TGYTLAHEHLHIDDQYAFICQEMNDLMTRGVRNVIEMTNRRNAQFMLDVMRETGINVVACTGYYPEHVATRSVQELAQEMDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMEQLALLQAHGVDLSRVTCDLKDNLDNILKMIDL-----GAYVQFDTIGKEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQ-SGFSQADVDVMLRENPSQFF. 290
9 -20.300d3ij6a1 c.1.9.0 (A:3-304) automated matches {Lactobacillus acidophilus [TaxId: 1579]}  ali model 3D-neighbors follow..  12  3...IDAYAHILPAKYYQDLDERLTKWPDQNTKQVISLANFTDSKTSAELCQSANEELSNLVDQHPGKFAGAVAILPMNNIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVELSQAMLQLV-QDYPNLKILVHHAGAMVPFFSGRIDHAQDFKKFYVDTAIL----NTPALQLAIDYYGIDHVLFGTDAPF---------AVMPSGADQIITQAINDLTISDKDKQKIFHDNYYSLI. 300
10 -19.400d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]}  ali model 3D-neighbors follow..  14  3...IDFHTHYLPTSYVETPQLTLNFMRDNDISYSILSLSSPDKAETIRLVEAANDDGKSLAQQYPDQLGYLAS---IPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHTMTFINMLKYHFFEKYPNIKVIIPHAGAFLGIVDDRIAQYAQKVHVYFDVAGAVL---PRQLPTLMSLAQPEHLLYGSDIPY----------TPLDGSRQLGHALATTDLLTNEQKQAIFYDNAHRLLT 305
11 -19.400d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]}  ali model 3D-neighbors follow..  11  2..IIDIHGHYTTAPKALIIENQLKKMQERGSDLTVFSPRIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAM-SPGVDPKTCIPELEKCVKEYGFVAINLNPDPSSPPLTDRIWYPIYEKMVELEIPAMIHVSTSCNKDFPELKFVIPHGGGAVPYHWGRFRGLAQEMKKPLLEDHVLNNIFFDTCVYHQPGIDLLNTVIPVDNVLFASEMIG---AVRGIDPRTGFYYDDTKRYIEASTILTPEEKQQIYEGNARRVYP 331
12 -19.200d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}  ali model 3D-neighbors follow..  15  2..WIDDHVHCFEKMALYYDYPD-EIGVKKGVTTVI-TTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELAQASLVKKAIQELPDFVVGIKAR---MSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKG---LTHCFNGTDKIKDFAWQA--YNKGVVFDIGHGTDSFNFHVAETALRE--MKAASISTDI----------ENGPVYDLATTMEKLRVV-GYDWPEIIEKVTKAPAENFH 262
13 -17.800d2wm1a_ c.1.9.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  3...IDIHSHILPKEWPDDPEVRIREMDQKGVTVQALSTVPVKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGT---MQAPELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFEKFPKLKVCFAHGG-ALVHDPLSLKLLTDVIGKDKVILGTDYPF------------PLGELEPGKLIESMEEFDEETKNKLKAGNALAFLG 329
14 -17.600d5vn5a_ c.1.9.0 (A:) automated matches {Sphingobium sp. [TaxId: 627192]}  ali model 3D-neighbors follow..  12  2..IIDCHGHVSAPVELWWPDGHIELLHNHGTDMQLISPRAKPARVVHWFCEEVNTLIHRQCTLIPEMFIPVAGLPQVAGEPENVFAEMDRCVSMGFKGFLLNPDEEAPPLGDRYWYPLYEKLCELDLPAHIHATGSNEETIATYNDDFPQLKVVVSHGGGAIPYQLGRFESQSRRSKRMAKLYFDTVLYTEGALRLLIETVGPERCLFGSECPGVGSTI---DPATGKQMDHIAPFIQKFDFLSDADKKLIFEDNARKVFN 329
15 -16.900d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]}  ali model 3D-neighbors follow..  11  2.PRIDMHSHFFPRISEQDPAFRIEEMDAQGVDVQVTCATPVEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDL--DLACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWDMMGGLVAMPAETQLAILSLI--LSGAFERIPKSLKICFGHGGGSFAF---SAVFNPGALELLVSVMGEDRVMLGSDYPFPLGEQ--------------IGGLVLSSNLGESAKDKIISGNASKFFN 329
16 -16.700d1po9a2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  2..FIDQHVHLEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPELLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGV-KCAISDHRSAAPDVYHLANMAAESRVGGLLPGVTVFHMGDSKKALQPIYDLLENC-DVPISKLLPNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAIPLARVTLSSDGNGSQPFFDDEGNAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLN 279
17 -16.500d4qrna1 c.1.9.0 (A:1-351) automated matches {Novosphingobium aromaticivorans [TaxId: 279238]}  ali model 3D-neighbors follow..  11  13YLRIATEEAFATREIIDLGERRIADMDATGIDKAILALTLHDLDEARTLATRANDTLADACQKYPDRFIGMGT---PQDPEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATSPDSMIDPMLEAGLDGAIFGFGVETGMHLLRLITI-KYPSLQIMVGHMGNSGVAWEPAIKFCQQVMGEDRVMYAMDYPY-------------QYVADEVRAMDAM-DMSAQTKKKFFQTNAEKWFK 350
18 -15.500d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]}  ali model 3D-neighbors follow..  12  3.GKVALEEHFAIPETLQIQDTRLKLMDAHGIETMILSLNIPDRRKAIEIARRANDVLAEECAKRPDRFLAFAA---LQDPDAATEELQRCVNDLGFVGALVNGFSQEGDYDLPQYRPFWGEVEKLDVPFYLHPRETAVHALRLM-DEHPRLNIILGHMGEGLPYMMWRIDMDYFNENFHITTSGNF---RTQTLIDAILEIGADRILFSTDWPFENIDH--------------ASDWFNATSIAEADRVKIGRTNARRLFK 323
19 -15.500d4i6ka_ c.1.9.0 (A:) automated matches {Acinetobacter baumannii [TaxId: 480119]}  ali model 3D-neighbors follow..  11  1MNCIDTHAHVYAPDYEATVQSFISHLDEHNFTHGVLSFLGTNNQAMLNAIQQYPDRLKGIAVVQH----------------TTTFNELVNLKAQGIVGVRLLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPPKYLVQLLPQLNEYSFDVVIDHF-KGIEDPDYQKFLSLLNVKQHWIKVSGFYRLGATPSYNIFKEKGFLHKLIWGSDWPHTQ---HESLITYEDAIKAFKQIVF-----DKHEQCLILNQNPTELFG 266
20 -15.100d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]}  ali model 3D-neighbors follow..  13  3LTAIDSHAHVFSRGLDAPLGDYLGQLRAHGFSHGVLSFLGTDNRYLLSALQTVPGQLRGVVMLER----------------DVEQATLAEMARLGVRGVRLLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVADIPVLVRALQPYGLDIVIDHF-RGLGQPGFAELLTLSGRGKVWVKVSGIYRLQGSPELCALEAHYGAERLMWGSDWPHTQ---HESEVSFGSAVEQFEALGC-----SAQLRQALLLDTARALFG 269
21 -14.400d3a4ja_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  14  16AGFTLTHEHICGSALAEKAVRGLRHARAAGVQTIVDVSTFRDVRLLAEVSRAADVHIVAATGLWFDPPLSMRMRSVEELTQFFLREIQHGIEDTGRAGIKVATTGKATPFQELVLRAAARASLATGVPVTTHTQRGGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTGLAARGYLVGLDRMPYSAITRALLIKALIDRGYKDRILVSHDWLFGFSSYVTNIMDV-AFVPLRVIPFLREKGVPPETLAGVTVANPARFL. 325
22 -14.200d2z26a_ c.1.9.4 (A:) Dihydroorotase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  10..PDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFN--EGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHADI--LRQRLTALKVVFEHITTKDVRDGNERLAATITPQHLMFNRNHMLRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESGCFNAPTALGSYATVFEE--MNALQHFEAFCSVNGPQFYG 302
23 -13.800d3pnza_ c.1.9.0 (A:) automated matches {Listeria monocytogenes [TaxId: 267410]}  ali model 3D-neighbors follow..  11  15LGFTYSHEHIVCVDDKEKSQLDVQDFADLGGKTIVDATAVRRVLDVAQISKETGIQIVGTAGFNYEWIENTTTDKLTEFVNEVENGLEGTPYKAGQVKF----YNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYL-EDQILVSGDTARKTYYKHYGHGPGLEYIPRFIDEANEKGFDGEKLVKKFFVDNPARCF. 325
24 -13.800d4rdza1 c.1.9.0 (A:1-314) automated matches {Vulcanisaeta moutnovskia [TaxId: 985053]}  ali model 3D-neighbors follow..  11  17MGLTLFHEHLNEDEELKRAIDAVNAAKKYGVKTIIDLTVACDVRFNEKVAKATGVNIIMGTGFYPFYFKNRGIDSLVDAFHDITIGIQGTNTRAAFVKA----SSGLTKDVEMAIRAAAKAHIKTDVPIITHSFVGNKDLIRIFKEEGVDLARTVIGHVGDTDDISFIEQILREGAFIGLDRFGLDIYLPLDKRVKTAIEL-IDQLLLSHDIDWYPPEVVRSTVPDWTMTLIFEKVIPRMRGITEEQINRVLIDNPRRLF. 312
25 -13.300d3tn4a_ c.1.9.0 (A:) automated matches {Geobacillus kaustophilus [TaxId: 1462]}  ali model 3D-neighbors follow..  13  15LGKTLIHEHFLFGESLRVAVEAAEKMKRHGIQTVVDPTPNRNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIA---KGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKT--LAYGVYIAFDRF---ERVRTLLALLRDGYEKQIMLSHDTPFTLPEPFAEMMKNWHVEHLFVNIIPALKGIRDEVLEQMFIGNPAALF. 322
26 -12.300d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}  ali model 3D-neighbors follow..  11  2..VVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQA------GQRLKVDFALYGGGVPGNLPEIRKMHDAGAVGFKSMMAASVPGVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEDVHCESGPQYLAP-PVRSAEMNIRLWEQLENGLIDTGRLSLERLVEVMCEKPAKLFG 319
27 -12.100d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]}  ali model 3D-neighbors follow..  14  1..FIDPHVHIYLPFMADTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWEGNSYCDYTFH-KNFFGVDDGEMYQTLRELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFID--TVGTDCPFDTEQKLLGKEA-EDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFG 322
28 -12.100d3pnua1 c.1.9.0 (A:1-335) automated matches {Campylobacter jejuni [TaxId: 192222]}  ali model 3D-neighbors follow..  12  6..PLDMHLHLR----DNQMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKD---NFTPLMTLFFKNYDEKFLYSAKDEIFGI-PAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDKIYEKLAKHFPRLKIVMEHITTTLCELLKDYENLYATITLHHLIIT---IAKRYEDKEALCELA---KVMFGSDS---APHPKDTKECCGC-APVILPVLAELQNSSEENLQKFLSDNTCKIYD 291
29 -11.900d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]}  ali model 3D-neighbors follow..  3..PVNAHTHLDMSAYEFQALPYADTLTRLGAGGV-IVWAPEVMDALLAREDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLERPGLRLGLSP--------HTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMP-VLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNHHLECGTFDWPAFALGTDSV---------ASGETLNVREEVTFARQLPGLDPRVLVRAAVKGGQRVVG 304
30 -11.900d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  10  2..FVEPHIHLDTDDVKQRAWQTLKWQIANGIQHVRTHVDVSDAKAMLEVKQEVAPWIDLQIVAFPQE-GILSYPNGEALLEEALRLGADVVGAIPHFEFTR-------EYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALA--ASHTTANGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGIRVKEMLFGHDGVFDPWYPL-GTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLN 307
31 -11.800d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}  ali model 3D-neighbors follow..  12  2..GIDAHVHVDEPDVVDTMEHATRSAVAGGTTTVV--PSALAESVKLDVDEYSEQTLYCDYGLHLILFQ--IEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKKVYAETCPQYASP-PIRPEGTQKSIWKGMNNGTFTINLTSMMKLVEIQCTNPAKVYG 377
32 -11.600d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}  ali model 3D-neighbors follow..  12  2..GIDVHTHVETVQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMA-SAIDYGYHIIVLDPTDSVIEELEVLPDL--------GITSFKVFMAYRGMMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHVTCEESLEEVMRAKSRRALAETCTHYLTP-PARAKKDHDVLWNALRNGVFETGRISLTQFVELVATRPAKVFG 323
33 -11.500d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Slime mold (Dictyostelium discoideum) [TaxId: 44689]}  ali model 3D-neighbors follow..  11  4...IDTHTHFQLPVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWDEKVNCDYSLH-KNSFMVTDQEMYHIFKDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVIVHV--QSIGAADVICKHRKEGVRVY------GEPIAAGLGVDGSHMAAFVMGPPIRP-RTKGVLMDYLARGDLD--CVGTDCTFCADQKAMGKDD-EDRMSIVWENGVNTGKLTWCQFVRATSSERARIFN 327
34 -11.000d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  13  3..LIDCHTHLSDEVLVAQALPRLDTLLSEGVSTIEIGLDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGL-----CEGIAFSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNAL-SADHLEYLDETGAKALAKA-----GTVAVLLPGAFYALREKQLPPVQAL---EIALATDC--------NPGTSPLTSLLLTMNMGATLFRMTVEECLTATTRNAAKALG 294
35 -10.800d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  12  2..FIDIHVHLRDPTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFY--------SLKEAGCVAFTDDGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSALLGL----SSRAPEAEEIQIARDGILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCENPNVNP-PLRKKEDRLALIEGVKRGIIDCGIISLKKLIEMFTINPARIIG 306
36 -10.500d3hkaa_ c.1.9.8 (A:) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]}  ali model 3D-neighbors follow..  18QPVTDMHTHLFSPNFGEICRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDTVLQLANVSDVVMTNDPFDDNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPEESNRGRIIPVAEKHNIPFAMMGKASMDGVEHLLREYPNNKFLVTML---SRENQHELVVLARKFSNLMIFGCWWFMNNPEEMTRMRMEMLGTSFIPQHSDARVLEQLIYKWHHSKSIIAEVLIDKYDD-EEEIKRDVADLFSRNFWRFVG 411
37 -9.020d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  10  2..FVDPHIH-GADTMNCDFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYI-SLLGVHPYHSEKHIRPPSERELSEIDSPAKMLTFAPEIESSEL-----------------LLRLVKRDIVLSAHSIATFEEFMKFYKE---GVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICHLSREMVKLVYKVKKANGIVLVTDSISAAGLK----AGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELG 283

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.