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current user: public |
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Query: gi|13507751|ref|NP_109700.1|(removed signal:1-21) hypothetical protein MPN012 [Mycoplasma pneumoniae M129], from M.pneumoniae |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 | |||||||
# | Score | Template | Links and tools | %id | First | SIQSDLRNLIQETTKQDVDVYKVIKTSEGRKNLITSLKKSYEVNPDKTTKLLLDAWKQSAEKGEIDIEKINFPDVGIYATGNDPLKIELKVEYFDMEYQDLNNFSINAKLNYNFNWHGNYSSNGFAAKKGDKHVFDLPLAIKPSSKNQSKTISFITKTGEGVDTEWIEFPVSLSWSLQGKINKVKEILRKSFWKAMILEQILNTQLISLDTCFS | Last |
1 | -5.230 | [S] COG4731 Uncharacterized protein conserved in bacteria | ali follow.. | 8 | 8 | .............VGAELTAFRILAAISCERLFWETGSRNLAASAPAFAADVVGLWATPGNGGQVEISRCGNSLCGKLVTSDHIKTNPGLKDIKNKDESQRSRTLKNLQMLYDFSGGPTKWTGGKVYNPEDGGVYAGTIELVSTTELKLK................................................................ | 174 |
2 | -5.120 | [R] KOG4357 Uncharacterized conserved protein (involved in mesoderm differentiation in humans) | ali follow.. | 15 | 77 | ...............DSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDT-ITKLWQTSLWNNHIQAERYMVDDNRAIFLFKD--TQAWDAKDFLIEQERCKGVTIENK......................................................................................................... | 168 |
3 | -5.030 | [T] KOG3941 Intermediate in Toll signal transduction pathway (ECSIT) | ali follow.. | 14 | 90 | .IYAALKNMADFGVERDLEVYKALINPKGKFIPTNMFQAEFMHYPKQ-QQCIIDLLEQMEDCGVMPDHEMEAMLLNVFGRQGHPLRKYWRMMYWMPKFKNLSPWPLPDPV........................................................................................................ | 199 |
4 | -5.020 | [C] COG2440 Ferredoxin-like protein | ali follow.. | 14 | 11 | ...............................................EEKLYQNRYLVDPGRPHIKVRPHERPSTHICPAKCYELNDKGQVETTSDGCMECGTCRVLCEASGEIVWNYPRGGFGVLFKFG.................................................................................... | 99 |
5 | -5.020 | [J] KOG0400 40S ribosomal protein S13 | ali follow.. | 23 | 83 | ELPEDLYNLIKERNRKDKDSKFRLILIESR---IHRLARYY-----RKVGALPPTWKYESATASALVA.................................................................................................................................................. | 151 |
6 | -4.320 | [L] COG4998 Predicted endonuclease (RecB family) | ali follow.. | 25 | 174 | ...AFLKLMASETVG-------AVKGVEGDEFLL-ELDPRVEV-PDGTTLVVLNRWGSPA-------------------------------------FVLAEPVSVGTHRARMRSWEGKVETGERVVYLGE................................................................................... | 255 |
7 | -4.300 | [G] COG3622 Hydroxypyruvate isomerase | ali follow.. | 7 | 113 | .......................HDCASVEKTFVDNLRYAADKLEAAGIRLVMEMINTLDIPGFY-RDKVGSANLFL---------------QYDIYHMQIMEGDLARTLENQLAAINHVQLADNPGRHGEINYRFLFEHLDRIGYQGWIGCEYKPATTTEAGLGWMK.............................................. | 255 |
8 | -4.290 | [H] COG5031 Uncharacterized protein involved in ubiquinone biosynthesis | ali follow.. | 14 | 22 | .....DRALKPSNGNTDFDFEDALDQTEMAQLAVDELKKIPEVNTLFAERWLPAPFNAKLPEGTLGHVYAIEKARGFDPYFYKKVPVVDDISYLKMLWRSTHDI-YHVVAGFDTDGIGEIGLQAFVLAQ..................................................................................... | 151 |
9 | -4.230 | [E] COG4583 Sarcosine oxidase gamma subunit | ali follow.. | 11 | 74 | ........FIVGEQPLSGVDMKTLLAALEPQAAGVDQSQGRRIEGKMTERVLVNLSLATFPVGRSAATLIGHIAAHITRIDISAFEIIVLRGFAESLWDDLVRMSLE........................................................................................................... | 180 |
10 | -4.210 | [G] KOG4518 Hydroxypyruvate isomerase | ali follow.. | 9 | 77 | TSVPGSEKLFRSQLDATIDFARQVQESDYTKTYTANLKIAADSLRASKMIGVIEPINKYAVPGYY-LADVAADNIQL---------------LADLYHLQHLHGNVSKTLEEYKALIGHFQIAQVPHRSGELDYGFVFKALQEFGYDGWIGCEYKPKTTTVEGLGWVS.............................................. | 258 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703. |