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Query: gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITISLast
1 -84.000IDP01228 peptidyl-prolyl cis-trans isomerase, cyclophilin-type BA_4283 [Bacillus anthracis str. Ames]  ali follow..  41  2............KTLGYILMENGEKIDLEFFPEEAPKTVENFKKLAE---------------QGFYDGVTFHRVIPGFVSQGGDPTGTGAGGPGYSIPCETDGNPHRHLVGSLSMAHAGRNTGGSQFFIVHEPQPHLDGVHTVFGKAT--SGIETVLNMRQGDVMKEVKVWEE......... 145
2 -73.200IDP91969 peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100009453 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  40  60ANFPQLSKEVAEDEAEVILHTSQGDIRIKLFPKLAPLAVENFLTHAK---------------EGYYNGITFHRVIDGFMVQTGDPKGDGTGGKGTGFKNEITPYLYNIR-GALAMANTGPNTNGSQFFINQSSNPSLDGKHPVFGQVID--GMDVVDKIAKAEKDEKDKPTTAITIDSIEV. 259
3 -70.800IDP92020 cyclophilin, putative [Toxoplasma gondii ME49] TGME49_120640 [Toxoplasma gondii ME49]  ali follow..  45  597.SASSAIAPSLRSGRTATIFTTMGDIFIRLFPQECPKTVENFCTHARN---------------GYYDQCIFHRVIKGFMIQTGDPNGDGTGGEGGDFEDEFHRALKHDRPFTVSMANAGPNTNGSQFFITTVPCSWLDNKHTVFGRVVQ--GMDVVTKIENVATNVEDKPKQDVKLLTIKV. 762
4 -67.500IDP01429 peptidyl-prolyl cis-trans isomerase B VC1849 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  38  2................ITLHTNFGDIKIQLNFEKAPVTSANFEQYCR---------------EGFYDNTLFHRVIDGFMIQGGGMTSGLREKERDPIRNEANNGLSNKV-GTIAMARTMPHSASSQFFINVNNNTFLDFRYCVFGEVV--EGMDIVNKIKGVSTGSQDVPLEEVVITGTTIE 163
5 -63.800IDP90287 18 kDa cyclophilin [Toxoplasma gondii ME49] TGME49_021210 [Toxoplasma gondii ME49]  ali follow..  39  10.LAVSGAVAENAGVRKAYMDIDIGRIILELREDIAPKTVKNFIGLFDK-----------------YKGSVFHRIIPDFMIQGGDFEHNGTGGHGRRFDDE-NFDLKHE-RGVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKIT-TESWPTVQAIEALGGS-GGRPSKVAKITDI... 175
6 -59.900IDP90285 peptidyl-prolyl isomerase, putative [Toxoplasma gondii ME49] TGME49_083850 [Toxoplasma gondii ME49]  ali follow..  42  360...................DNAPKRVVFALYNDTVPKTAENFRALCTGEKGEGKK-----GKPLCFKNSLFHRVIPGFMMQGGDFTGDGTGGEGPQFNDE-KFVDQHTGRGQLSMANCGPNTNSSQFFITFGPAPHLDGKHVVFGEVV--EGQDVLDEVEDVETDKNDRPKQDVQIVDC... 516
7 -5.780IDP04299 deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar eltor str. N16961] VCA0840 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  24.......................................................................STQVGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTAILFAKRDLDGCEIYVTHFPCPNCAAKIIQTGAVHCPEQSEDFLSRWGDKIKVSQDMFLQAGVKVHWLP 142
8 -5.700IDP90906 gene: ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia pestis CO92] YPO3183 [Yersinia pestis CO92]  ali follow..  18  25.......................................................................NPNVGCVLVRDGEIVGEG-----------YHLRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVD 124
9 -5.630IDP01692 gene: ribD; riboflavin biosynthesis protein ribD [Francisella tularensis subsp. tularensis SCHU S4] FTT1671 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  26.......................................................................NPMVGCIIVKNGAIISEG-----------WHETVGEAHAEVHALTKAVDKAKGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITVE 125
10 -5.590IDP00091 gene: ribD; bifunctional pyrimidine deaminase/reductase NTL01SF0342 [Shigella flexneri 2a str. 2457T]  ali follow..  20  24.......................................................................NPNVGCVIVKDGEIVGEG-----------YHQRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVS 123

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 2 4 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.