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Query: gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQRLast
1 -6.160IDP95308 hypothetical protein VCA0021 [Vibrio cholerae O1 biovar El Tor str. N16961] NP_232422 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  94.................LTQAGIYYTDQEVIPDAAYTFVRGFAWVGIAVCLLALAVVGPLAFVGAGGFALLAFGLTNFHPTVHKKEVYFADQLIV-IKEKMVDLNTDSTDEPWFDRRLFFSSLDEKTHFIELVKSIHNNVD 219
2 -6.120IDP90365 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_102 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  18  42....................................RMLGSLLLLLGIFGGGCLLFRR--------------FLRSRGHLPSGNSSIKILDQRVLASKTSIYVIKVANKTLV------VAERGERV-TLLSEF........ 117
3 -5.880IDP95383 set238a-020 [Vibrio cholerae]  ali follow..  11  94.................LTQAGIYYTDQEVIPDAAYTFVRGFAWVGIAVCLLALAVVGPLAFVGAGGFALLAFGLTNFHPTVHKKEVYFADQLIV-IKEKMVDLNTDSTDEPWFDRRLFFSSLDEKTHFIELVKSIHNNVD 219
4 -5.410IDP95382 set238a-019 [Vibrio cholerae]  ali follow..  10  94.................LTQAGVHYTDQEVIPDAAYTFVRGFAWVGIAVCLLALAVVGPLAFVGAGGFALLAFGLTNFRPTVDHENVYFADQLIV-IKEKMVILNTESVRDPRFRRSLFFGSFDEKQRFIELVKGLHHNVD 219
5 -5.320IDP92567 polyprotein, partial [Dengue virus 3] AEF33500 [Dengue virus 3]  ali follow..  14  1....SWPLNEGVMAV----GLVSILASSLLRNDVP--MAGPLVAGGLLIACYVITGTSADLTVEKAA----------DVTWEEEAEQTGVSHNLMITVDDDGTMRIKDDELKTALLIVSGIFPYSIPATL........... 118
6 -5.310IDP02342 putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0737 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  2........KKMSKHIVLSFAVSSLLFSQAYALLSGGKFTHGTSGT---------------IHTSGNTVTITGKGQNHVIQWGGGFNIGQNESVNFNGNQNYLNIAYQKDASKIDGALNRGVNPMGVL.............. 112
7 -5.170IDP05701 hypothetical protein lmo2522 [Listeria monocytogenes EGD-e] lmo2522 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKKTVVAIAAGLIIAGSGSTQAFAAEYKVQDGDSLWKI------------------------SNENNVSIKQLKEDNNLSSDIIFQVNSSEKKSTTNNNSEYTVVAGDTLGHIAVDNGVTVNQLKSWNNLSS......... 113
8 -5.060IDP04214 gene: ompN; outer membrane protein N precursor [Salmonella typhimurium LT2] STM1473_1_377 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  1..................................MKRKVLALVIPALLAAGAAHAAE---YNKDGNKLDLYGKVDGLHYFSDDSSKDGDQTYMRVGFKGE----TQINDQLTGYGQWEYNVQANT................ 85
9 -5.040IDP02752 gene: grxB; glutaredoxin 2 [Francisella tularensis subsp. tularensis SCHU S4] FTT0650c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  8  1............................................MKIYLYHHCPYCIKVRLVADLSNFDYQMI---------ILANDDEKAHIDRIGSKQVPFLEKDDGTFI--------KESDEICKFIAKV........ 72
10 -4.920IDP05253 putative flagellar protein [Clostridium difficile 630] CD0259 [Peptoclostridium difficile 630]  ali follow..  13  5.....................................................................SLKISQGTLLKKYNDKYVKILDIVNISKNNSIIILKIGEEGCIM-----SSSSSMSKIKDLTK......... 63
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;